Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
HCN1O60741 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HCN1O60741 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.9■□□□□ 0.94
HCN1O60741 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCN1O60741 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HCN1O60741 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCN1O60741 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.89■□□□□ 0.94
HCN1O60741 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HCN1O60741 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
HCN1O60741 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HCN1O60741 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HCN1O60741 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
HCN1O60741 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.89■□□□□ 0.93
HCN1O60741 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.89■□□□□ 0.93
HCN1O60741 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.89■□□□□ 0.93
HCN1O60741 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HCN1O60741 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HCN1O60741 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HCN1O60741 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HCN1O60741 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HCN1O60741 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HCN1O60741 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HCN1O60741 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HCN1O60741 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.88■□□□□ 0.93
HCN1O60741 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.88■□□□□ 0.93
HCN1O60741 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HCN1O60741 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
HCN1O60741 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HCN1O60741 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.87■□□□□ 0.93
HCN1O60741 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.87■□□□□ 0.93
HCN1O60741 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HCN1O60741 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HCN1O60741 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.87■□□□□ 0.93
HCN1O60741 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HCN1O60741 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HCN1O60741 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.86■□□□□ 0.93
HCN1O60741 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HCN1O60741 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.86■□□□□ 0.93
HCN1O60741 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HCN1O60741 AL136116.3-201ENST00000402907 1138 ntBASIC20.86■□□□□ 0.93
HCN1O60741 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HCN1O60741 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HCN1O60741 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.86■□□□□ 0.93
HCN1O60741 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.86■□□□□ 0.93
HCN1O60741 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HCN1O60741 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HCN1O60741 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
HCN1O60741 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.85■□□□□ 0.93
HCN1O60741 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.85■□□□□ 0.93
HCN1O60741 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HCN1O60741 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.85■□□□□ 0.93
HCN1O60741 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
HCN1O60741 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.85■□□□□ 0.93
HCN1O60741 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.85■□□□□ 0.93
HCN1O60741 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.85■□□□□ 0.93
HCN1O60741 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.85■□□□□ 0.93
HCN1O60741 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
HCN1O60741 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HCN1O60741 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HCN1O60741 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.84■□□□□ 0.93
HCN1O60741 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HCN1O60741 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.84■□□□□ 0.93
HCN1O60741 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.84■□□□□ 0.93
HCN1O60741 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
HCN1O60741 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HCN1O60741 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HCN1O60741 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HCN1O60741 AL161729.1-201ENST00000604104 1402 ntBASIC20.84■□□□□ 0.93
HCN1O60741 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HCN1O60741 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HCN1O60741 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HCN1O60741 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HCN1O60741 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HCN1O60741 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HCN1O60741 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HCN1O60741 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HCN1O60741 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HCN1O60741 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HCN1O60741 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HCN1O60741 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HCN1O60741 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HCN1O60741 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.83■□□□□ 0.93
HCN1O60741 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.83■□□□□ 0.93
HCN1O60741 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HCN1O60741 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
HCN1O60741 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HCN1O60741 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.83■□□□□ 0.92
HCN1O60741 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HCN1O60741 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HCN1O60741 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.82■□□□□ 0.92
HCN1O60741 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.82■□□□□ 0.92
HCN1O60741 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HCN1O60741 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.82■□□□□ 0.92
HCN1O60741 AL512631.2-201ENST00000604634 923 ntBASIC20.82■□□□□ 0.92
HCN1O60741 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HCN1O60741 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HCN1O60741 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HCN1O60741 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HCN1O60741 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HCN1O60741 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms