Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
GFRA3O60609 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.31■■□□□ 1.16
GFRA3O60609 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.31■■□□□ 1.16
GFRA3O60609 DRD5P2-201ENST00000421395 2012 ntBASIC22.31■■□□□ 1.16
GFRA3O60609 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC22.3■■□□□ 1.16
GFRA3O60609 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
GFRA3O60609 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
GFRA3O60609 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
GFRA3O60609 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
GFRA3O60609 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.3■■□□□ 1.16
GFRA3O60609 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.3■■□□□ 1.16
GFRA3O60609 AL596275.1-201ENST00000423464 877 ntBASIC22.3■■□□□ 1.16
GFRA3O60609 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.3■■□□□ 1.16
GFRA3O60609 SLC7A5P2-201ENST00000553010 536 ntBASIC22.3■■□□□ 1.16
GFRA3O60609 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.3■■□□□ 1.16
GFRA3O60609 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.3■■□□□ 1.16
GFRA3O60609 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.3■■□□□ 1.16
GFRA3O60609 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.29■■□□□ 1.16
GFRA3O60609 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
GFRA3O60609 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
GFRA3O60609 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
GFRA3O60609 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
GFRA3O60609 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
GFRA3O60609 AC133041.1-202ENST00000642053 222 ntBASIC22.29■■□□□ 1.16
GFRA3O60609 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
GFRA3O60609 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.29■■□□□ 1.16
GFRA3O60609 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
GFRA3O60609 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
GFRA3O60609 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
GFRA3O60609 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
GFRA3O60609 AC131274.2-201ENST00000580697 1507 ntBASIC22.27■■□□□ 1.16
GFRA3O60609 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
GFRA3O60609 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
GFRA3O60609 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
GFRA3O60609 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
GFRA3O60609 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
GFRA3O60609 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.27■■□□□ 1.16
GFRA3O60609 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
GFRA3O60609 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
GFRA3O60609 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC22.27■■□□□ 1.16
GFRA3O60609 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC22.26■■□□□ 1.15
GFRA3O60609 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
GFRA3O60609 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
GFRA3O60609 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.26■■□□□ 1.15
GFRA3O60609 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.26■■□□□ 1.15
GFRA3O60609 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.26■■□□□ 1.15
GFRA3O60609 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.26■■□□□ 1.15
GFRA3O60609 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
GFRA3O60609 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
GFRA3O60609 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
GFRA3O60609 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
GFRA3O60609 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
GFRA3O60609 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.25■■□□□ 1.15
GFRA3O60609 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.25■■□□□ 1.15
GFRA3O60609 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
GFRA3O60609 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
GFRA3O60609 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
GFRA3O60609 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
GFRA3O60609 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
GFRA3O60609 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.24■■□□□ 1.15
GFRA3O60609 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
GFRA3O60609 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
GFRA3O60609 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
GFRA3O60609 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22.24■■□□□ 1.15
GFRA3O60609 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.24■■□□□ 1.15
GFRA3O60609 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.24■■□□□ 1.15
GFRA3O60609 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.24■■□□□ 1.15
GFRA3O60609 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.24■■□□□ 1.15
GFRA3O60609 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.24■■□□□ 1.15
GFRA3O60609 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
GFRA3O60609 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.23■■□□□ 1.15
GFRA3O60609 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
GFRA3O60609 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
GFRA3O60609 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
GFRA3O60609 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
GFRA3O60609 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.23■■□□□ 1.15
GFRA3O60609 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
GFRA3O60609 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
GFRA3O60609 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.23■■□□□ 1.15
GFRA3O60609 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
GFRA3O60609 AP004609.3-201ENST00000610705 1884 ntBASIC22.23■■□□□ 1.15
GFRA3O60609 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
GFRA3O60609 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
GFRA3O60609 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
GFRA3O60609 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
GFRA3O60609 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
GFRA3O60609 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
GFRA3O60609 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
GFRA3O60609 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.22■■□□□ 1.15
GFRA3O60609 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.22■■□□□ 1.15
GFRA3O60609 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.22■■□□□ 1.15
GFRA3O60609 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
GFRA3O60609 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.21■■□□□ 1.15
GFRA3O60609 RPS2P4-201ENST00000476944 856 ntBASIC22.21■■□□□ 1.15
GFRA3O60609 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.21■■□□□ 1.15
GFRA3O60609 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.21■■□□□ 1.15
GFRA3O60609 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.21■■□□□ 1.15
GFRA3O60609 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
GFRA3O60609 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
GFRA3O60609 AC098590.1-201ENST00000468126 897 ntBASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms