Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.57■■□□□ 1.04
LCMT2O60294 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.57■■□□□ 1.04
LCMT2O60294 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LCMT2O60294 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LCMT2O60294 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LCMT2O60294 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LCMT2O60294 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LCMT2O60294 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
LCMT2O60294 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LCMT2O60294 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LCMT2O60294 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.56■■□□□ 1.04
LCMT2O60294 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.56■■□□□ 1.04
LCMT2O60294 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.56■■□□□ 1.04
LCMT2O60294 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.56■■□□□ 1.04
LCMT2O60294 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.56■■□□□ 1.04
LCMT2O60294 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LCMT2O60294 AC079630.1-202ENST00000618127 1840 ntBASIC21.55■■□□□ 1.04
LCMT2O60294 AL512631.2-201ENST00000604634 923 ntBASIC21.55■■□□□ 1.04
LCMT2O60294 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.55■■□□□ 1.04
LCMT2O60294 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LCMT2O60294 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LCMT2O60294 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LCMT2O60294 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
LCMT2O60294 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LCMT2O60294 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
LCMT2O60294 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
LCMT2O60294 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.54■■□□□ 1.04
LCMT2O60294 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LCMT2O60294 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LCMT2O60294 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LCMT2O60294 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.54■■□□□ 1.04
LCMT2O60294 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.54■■□□□ 1.04
LCMT2O60294 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LCMT2O60294 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.53■■□□□ 1.04
LCMT2O60294 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.53■■□□□ 1.04
LCMT2O60294 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LCMT2O60294 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LCMT2O60294 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.52■■□□□ 1.04
LCMT2O60294 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
LCMT2O60294 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.52■■□□□ 1.04
LCMT2O60294 MIR4466-201ENST00000606121 54 ntBASIC21.52■■□□□ 1.04
LCMT2O60294 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
LCMT2O60294 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LCMT2O60294 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
LCMT2O60294 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
LCMT2O60294 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
LCMT2O60294 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LCMT2O60294 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LCMT2O60294 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
LCMT2O60294 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.51■■□□□ 1.03
LCMT2O60294 C17orf82-201ENST00000623772 1530 ntBASIC21.51■■□□□ 1.03
LCMT2O60294 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LCMT2O60294 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.51■■□□□ 1.03
LCMT2O60294 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.51■■□□□ 1.03
LCMT2O60294 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LCMT2O60294 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.51■■□□□ 1.03
LCMT2O60294 AC131281.2-201ENST00000520478 145 ntBASIC21.51■■□□□ 1.03
LCMT2O60294 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LCMT2O60294 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.51■■□□□ 1.03
LCMT2O60294 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.51■■□□□ 1.03
LCMT2O60294 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LCMT2O60294 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LCMT2O60294 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LCMT2O60294 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
LCMT2O60294 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LCMT2O60294 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LCMT2O60294 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LCMT2O60294 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
LCMT2O60294 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LCMT2O60294 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LCMT2O60294 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
LCMT2O60294 AC092068.2-201ENST00000590491 1708 ntBASIC21.5■■□□□ 1.03
LCMT2O60294 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.5■■□□□ 1.03
LCMT2O60294 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LCMT2O60294 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
LCMT2O60294 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.5■■□□□ 1.03
LCMT2O60294 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LCMT2O60294 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LCMT2O60294 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LCMT2O60294 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.5■■□□□ 1.03
LCMT2O60294 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
LCMT2O60294 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LCMT2O60294 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
LCMT2O60294 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LCMT2O60294 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LCMT2O60294 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LCMT2O60294 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LCMT2O60294 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LCMT2O60294 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LCMT2O60294 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.49■■□□□ 1.03
LCMT2O60294 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LCMT2O60294 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
LCMT2O60294 AC144652.1-201ENST00000609974 1624 ntBASIC21.48■■□□□ 1.03
LCMT2O60294 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.48■■□□□ 1.03
LCMT2O60294 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.48■■□□□ 1.03
LCMT2O60294 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.48■■□□□ 1.03
LCMT2O60294 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LCMT2O60294 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
LCMT2O60294 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LCMT2O60294 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms