Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXS1O43638 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXS1O43638 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXS1O43638 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXS1O43638 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
FOXS1O43638 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
FOXS1O43638 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.27■■□□□ 1
FOXS1O43638 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.27■■□□□ 1
FOXS1O43638 AC092171.4-201ENST00000609130 632 ntBASIC21.27■■□□□ 1
FOXS1O43638 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
FOXS1O43638 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.27■■□□□ 1
FOXS1O43638 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.27■■□□□ 1
FOXS1O43638 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXS1O43638 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
FOXS1O43638 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
FOXS1O43638 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
FOXS1O43638 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
FOXS1O43638 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXS1O43638 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXS1O43638 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXS1O43638 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.26■□□□□ 0.99
FOXS1O43638 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXS1O43638 DUX4L19-201ENST00000557448 1267 ntBASIC21.26■□□□□ 0.99
FOXS1O43638 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXS1O43638 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXS1O43638 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXS1O43638 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXS1O43638 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.25■□□□□ 0.99
FOXS1O43638 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXS1O43638 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXS1O43638 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
FOXS1O43638 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXS1O43638 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.25■□□□□ 0.99
FOXS1O43638 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXS1O43638 SERBP1P1-201ENST00000396021 1160 ntBASIC21.25■□□□□ 0.99
FOXS1O43638 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FOXS1O43638 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
FOXS1O43638 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXS1O43638 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.25■□□□□ 0.99
FOXS1O43638 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXS1O43638 AL136162.1-201ENST00000607711 1078 ntBASIC21.25■□□□□ 0.99
FOXS1O43638 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
FOXS1O43638 AC009086.3-201ENST00000623486 1008 ntBASIC21.25■□□□□ 0.99
FOXS1O43638 SYT6-210ENST00000641643 1587 ntBASIC21.25■□□□□ 0.99
FOXS1O43638 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.25■□□□□ 0.99
FOXS1O43638 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.24■□□□□ 0.99
FOXS1O43638 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXS1O43638 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXS1O43638 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXS1O43638 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXS1O43638 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
FOXS1O43638 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXS1O43638 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.24■□□□□ 0.99
FOXS1O43638 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXS1O43638 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
FOXS1O43638 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.23■□□□□ 0.99
FOXS1O43638 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.23■□□□□ 0.99
FOXS1O43638 AC144652.1-201ENST00000609974 1624 ntBASIC21.23■□□□□ 0.99
FOXS1O43638 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXS1O43638 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXS1O43638 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.23■□□□□ 0.99
FOXS1O43638 MIR638-201ENST00000385237 100 ntBASIC21.23■□□□□ 0.99
FOXS1O43638 PBX2P1-201ENST00000493219 1291 ntBASIC21.23■□□□□ 0.99
FOXS1O43638 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.23■□□□□ 0.99
FOXS1O43638 AC024257.2-201ENST00000549699 147 ntBASIC21.23■□□□□ 0.99
FOXS1O43638 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.23■□□□□ 0.99
FOXS1O43638 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.23■□□□□ 0.99
FOXS1O43638 AC106739.1-201ENST00000617035 715 ntBASIC21.23■□□□□ 0.99
FOXS1O43638 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.23■□□□□ 0.99
FOXS1O43638 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXS1O43638 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FOXS1O43638 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.23■□□□□ 0.99
FOXS1O43638 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.23■□□□□ 0.99
FOXS1O43638 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXS1O43638 FP325331.1-202ENST00000623531 1380 ntBASIC21.23■□□□□ 0.99
FOXS1O43638 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FOXS1O43638 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.22■□□□□ 0.99
FOXS1O43638 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXS1O43638 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXS1O43638 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
FOXS1O43638 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.22■□□□□ 0.99
FOXS1O43638 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
FOXS1O43638 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.22■□□□□ 0.99
FOXS1O43638 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXS1O43638 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FOXS1O43638 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXS1O43638 AC079630.1-202ENST00000618127 1840 ntBASIC21.22■□□□□ 0.99
FOXS1O43638 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXS1O43638 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXS1O43638 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXS1O43638 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXS1O43638 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXS1O43638 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.21■□□□□ 0.99
FOXS1O43638 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FOXS1O43638 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FOXS1O43638 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXS1O43638 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.21■□□□□ 0.99
FOXS1O43638 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FOXS1O43638 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FOXS1O43638 AC135279.3-201ENST00000610945 1311 ntBASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms