Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
XRCC2O43543 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC2O43543 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC2O43543 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC2O43543 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
XRCC2O43543 AC005703.6-201ENST00000623265 1329 ntBASIC19.51■□□□□ 0.71
XRCC2O43543 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.5■□□□□ 0.71
XRCC2O43543 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRCC2O43543 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
XRCC2O43543 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRCC2O43543 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.5■□□□□ 0.71
XRCC2O43543 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRCC2O43543 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.5■□□□□ 0.71
XRCC2O43543 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRCC2O43543 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.5■□□□□ 0.71
XRCC2O43543 DUSP8P3-201ENST00000399571 1760 ntBASIC19.49■□□□□ 0.71
XRCC2O43543 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
XRCC2O43543 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.49■□□□□ 0.71
XRCC2O43543 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.49■□□□□ 0.71
XRCC2O43543 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
XRCC2O43543 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.49■□□□□ 0.71
XRCC2O43543 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
XRCC2O43543 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
XRCC2O43543 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
XRCC2O43543 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
XRCC2O43543 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
XRCC2O43543 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.48■□□□□ 0.71
XRCC2O43543 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.48■□□□□ 0.71
XRCC2O43543 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.48■□□□□ 0.71
XRCC2O43543 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.48■□□□□ 0.71
XRCC2O43543 AC009299.2-201ENST00000482477 511 ntBASIC19.48■□□□□ 0.71
XRCC2O43543 MIR4787-201ENST00000607364 84 ntBASIC19.48■□□□□ 0.71
XRCC2O43543 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
XRCC2O43543 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
XRCC2O43543 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.48■□□□□ 0.71
XRCC2O43543 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
XRCC2O43543 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.47■□□□□ 0.71
XRCC2O43543 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
XRCC2O43543 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.47■□□□□ 0.71
XRCC2O43543 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
XRCC2O43543 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
XRCC2O43543 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
XRCC2O43543 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
XRCC2O43543 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
XRCC2O43543 MTDHP2-201ENST00000601468 714 ntBASIC19.47■□□□□ 0.71
XRCC2O43543 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.47■□□□□ 0.71
XRCC2O43543 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
XRCC2O43543 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
XRCC2O43543 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
XRCC2O43543 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
XRCC2O43543 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
XRCC2O43543 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.47■□□□□ 0.71
XRCC2O43543 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
XRCC2O43543 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
XRCC2O43543 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
XRCC2O43543 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.46■□□□□ 0.71
XRCC2O43543 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
XRCC2O43543 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
XRCC2O43543 AC239859.2-201ENST00000444165 318 ntBASIC19.46■□□□□ 0.71
XRCC2O43543 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
XRCC2O43543 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.46■□□□□ 0.71
XRCC2O43543 AL451085.2-201ENST00000605085 799 ntBASIC19.46■□□□□ 0.71
XRCC2O43543 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
XRCC2O43543 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.46■□□□□ 0.71
XRCC2O43543 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
XRCC2O43543 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
XRCC2O43543 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
XRCC2O43543 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.45■□□□□ 0.7
XRCC2O43543 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
XRCC2O43543 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
XRCC2O43543 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
XRCC2O43543 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
XRCC2O43543 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
XRCC2O43543 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.45■□□□□ 0.7
XRCC2O43543 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
XRCC2O43543 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
XRCC2O43543 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XRCC2O43543 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XRCC2O43543 AC079630.1-202ENST00000618127 1840 ntBASIC19.44■□□□□ 0.7
XRCC2O43543 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
XRCC2O43543 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
XRCC2O43543 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XRCC2O43543 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.44■□□□□ 0.7
XRCC2O43543 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.44■□□□□ 0.7
XRCC2O43543 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
XRCC2O43543 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
XRCC2O43543 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
XRCC2O43543 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
XRCC2O43543 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
XRCC2O43543 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
XRCC2O43543 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
XRCC2O43543 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
XRCC2O43543 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
XRCC2O43543 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.42■□□□□ 0.7
XRCC2O43543 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.42■□□□□ 0.7
XRCC2O43543 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC2O43543 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC2O43543 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC2O43543 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC2O43543 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms