Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
KLF4O43474 AC021242.3-201ENST00000607598 1377 ntBASIC20.58■□□□□ 0.88
KLF4O43474 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KLF4O43474 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.57■□□□□ 0.88
KLF4O43474 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KLF4O43474 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KLF4O43474 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KLF4O43474 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
KLF4O43474 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
KLF4O43474 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.57■□□□□ 0.88
KLF4O43474 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.57■□□□□ 0.88
KLF4O43474 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.57■□□□□ 0.88
KLF4O43474 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.57■□□□□ 0.88
KLF4O43474 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
KLF4O43474 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KLF4O43474 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
KLF4O43474 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KLF4O43474 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.57■□□□□ 0.88
KLF4O43474 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.56■□□□□ 0.88
KLF4O43474 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KLF4O43474 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
KLF4O43474 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KLF4O43474 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KLF4O43474 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KLF4O43474 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KLF4O43474 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.56■□□□□ 0.88
KLF4O43474 UNC93B8-201ENST00000511903 705 ntBASIC20.56■□□□□ 0.88
KLF4O43474 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.56■□□□□ 0.88
KLF4O43474 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KLF4O43474 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KLF4O43474 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
KLF4O43474 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KLF4O43474 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KLF4O43474 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
KLF4O43474 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.55■□□□□ 0.88
KLF4O43474 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KLF4O43474 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KLF4O43474 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.55■□□□□ 0.88
KLF4O43474 MIR4281-201ENST00000580852 62 ntBASIC20.55■□□□□ 0.88
KLF4O43474 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.55■□□□□ 0.88
KLF4O43474 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KLF4O43474 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
KLF4O43474 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KLF4O43474 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
KLF4O43474 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
KLF4O43474 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
KLF4O43474 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.54■□□□□ 0.88
KLF4O43474 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.54■□□□□ 0.88
KLF4O43474 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.54■□□□□ 0.88
KLF4O43474 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KLF4O43474 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.54■□□□□ 0.88
KLF4O43474 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KLF4O43474 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.54■□□□□ 0.88
KLF4O43474 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KLF4O43474 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KLF4O43474 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLF4O43474 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KLF4O43474 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.53■□□□□ 0.88
KLF4O43474 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.53■□□□□ 0.88
KLF4O43474 AF131216.4-201ENST00000638924 1588 ntBASIC20.53■□□□□ 0.88
KLF4O43474 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.53■□□□□ 0.88
KLF4O43474 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLF4O43474 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.52■□□□□ 0.88
KLF4O43474 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KLF4O43474 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.52■□□□□ 0.88
KLF4O43474 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.52■□□□□ 0.88
KLF4O43474 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLF4O43474 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.52■□□□□ 0.88
KLF4O43474 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KLF4O43474 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.52■□□□□ 0.88
KLF4O43474 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
KLF4O43474 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLF4O43474 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
KLF4O43474 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
KLF4O43474 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
KLF4O43474 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.51■□□□□ 0.87
KLF4O43474 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KLF4O43474 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLF4O43474 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLF4O43474 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KLF4O43474 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.51■□□□□ 0.87
KLF4O43474 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.51■□□□□ 0.87
KLF4O43474 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KLF4O43474 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
KLF4O43474 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KLF4O43474 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLF4O43474 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLF4O43474 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.5■□□□□ 0.87
KLF4O43474 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.5■□□□□ 0.87
KLF4O43474 KRT16P3-201ENST00000439127 1283 ntBASIC20.5■□□□□ 0.87
KLF4O43474 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.5■□□□□ 0.87
KLF4O43474 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.5■□□□□ 0.87
KLF4O43474 AC092028.1-203ENST00000608262 953 ntBASIC20.5■□□□□ 0.87
KLF4O43474 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.5■□□□□ 0.87
KLF4O43474 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
KLF4O43474 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLF4O43474 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.5■□□□□ 0.87
KLF4O43474 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KLF4O43474 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
KLF4O43474 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms