Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
PER1O15534 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
PER1O15534 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
PER1O15534 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PER1O15534 AC092068.2-201ENST00000590491 1708 ntBASIC30.81■■■□□ 2.52
PER1O15534 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PER1O15534 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
PER1O15534 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PER1O15534 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
PER1O15534 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PER1O15534 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC30.8■■■□□ 2.52
PER1O15534 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC30.8■■■□□ 2.52
PER1O15534 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
PER1O15534 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
PER1O15534 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
PER1O15534 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC30.79■■■□□ 2.52
PER1O15534 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
PER1O15534 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC30.79■■■□□ 2.52
PER1O15534 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PER1O15534 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC30.78■■■□□ 2.52
PER1O15534 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PER1O15534 AC144652.1-201ENST00000609974 1624 ntBASIC30.77■■■□□ 2.52
PER1O15534 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PER1O15534 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC30.77■■■□□ 2.52
PER1O15534 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PER1O15534 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
PER1O15534 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC30.77■■■□□ 2.52
PER1O15534 PEMT-206ENST00000435340 960 ntTSL 5 BASIC30.77■■■□□ 2.52
PER1O15534 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC30.77■■■□□ 2.52
PER1O15534 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PER1O15534 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
PER1O15534 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PER1O15534 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
PER1O15534 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
PER1O15534 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC30.76■■■□□ 2.51
PER1O15534 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC30.76■■■□□ 2.51
PER1O15534 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
PER1O15534 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
PER1O15534 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
PER1O15534 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PER1O15534 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC30.75■■■□□ 2.51
PER1O15534 AL136116.3-201ENST00000402907 1138 ntBASIC30.75■■■□□ 2.51
PER1O15534 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
PER1O15534 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC30.75■■■□□ 2.51
PER1O15534 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC30.75■■■□□ 2.51
PER1O15534 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC30.75■■■□□ 2.51
PER1O15534 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC30.74■■■□□ 2.51
PER1O15534 GTSE1-AS1-202ENST00000623117 1518 ntBASIC30.74■■■□□ 2.51
PER1O15534 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
PER1O15534 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC30.74■■■□□ 2.51
PER1O15534 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
PER1O15534 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
PER1O15534 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC30.73■■■□□ 2.51
PER1O15534 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PER1O15534 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PER1O15534 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
PER1O15534 FP325331.1-202ENST00000623531 1380 ntBASIC30.73■■■□□ 2.51
PER1O15534 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PER1O15534 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
PER1O15534 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
PER1O15534 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC30.72■■■□□ 2.51
PER1O15534 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC30.72■■■□□ 2.51
PER1O15534 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
PER1O15534 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC30.72■■■□□ 2.51
PER1O15534 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC30.72■■■□□ 2.51
PER1O15534 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PER1O15534 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC30.72■■■□□ 2.51
PER1O15534 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC30.72■■■□□ 2.51
PER1O15534 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
PER1O15534 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PER1O15534 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
PER1O15534 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PER1O15534 AC008406.3-201ENST00000620001 1374 ntBASIC30.71■■■□□ 2.51
PER1O15534 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
PER1O15534 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
PER1O15534 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC30.71■■■□□ 2.51
PER1O15534 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
PER1O15534 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
PER1O15534 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
PER1O15534 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PER1O15534 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC30.71■■■□□ 2.51
PER1O15534 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PER1O15534 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC30.71■■■□□ 2.51
PER1O15534 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
PER1O15534 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.51
PER1O15534 AC099791.2-201ENST00000605725 427 ntBASIC30.7■■■□□ 2.51
PER1O15534 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC30.7■■■□□ 2.5
PER1O15534 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
PER1O15534 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
PER1O15534 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PER1O15534 AC006455.2-201ENST00000429931 906 ntBASIC30.69■■■□□ 2.5
PER1O15534 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC30.69■■■□□ 2.5
PER1O15534 DUX4L4-201ENST00000566884 1269 ntBASIC30.69■■■□□ 2.5
PER1O15534 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
PER1O15534 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PER1O15534 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
PER1O15534 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PER1O15534 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PER1O15534 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC30.68■■■□□ 2.5
PER1O15534 SRD5A1P1-201ENST00000442297 786 ntBASIC30.68■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms