Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.07■■□□□ 1.44
TRANK1O15050 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.07■■□□□ 1.44
TRANK1O15050 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRANK1O15050 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRANK1O15050 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.07■■□□□ 1.44
TRANK1O15050 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TRANK1O15050 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.07■■□□□ 1.44
TRANK1O15050 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TRANK1O15050 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TRANK1O15050 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TRANK1O15050 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRANK1O15050 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.06■■□□□ 1.44
TRANK1O15050 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
TRANK1O15050 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.06■■□□□ 1.44
TRANK1O15050 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRANK1O15050 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.06■■□□□ 1.44
TRANK1O15050 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
TRANK1O15050 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.06■■□□□ 1.44
TRANK1O15050 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.06■■□□□ 1.44
TRANK1O15050 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.06■■□□□ 1.44
TRANK1O15050 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TRANK1O15050 pRNA.6-201ENST00000610482 90 ntBASIC24.06■■□□□ 1.44
TRANK1O15050 pRNA.5-201ENST00000612139 90 ntBASIC24.06■■□□□ 1.44
TRANK1O15050 pRNA.11-201ENST00000618423 90 ntBASIC24.06■■□□□ 1.44
TRANK1O15050 pRNA.13-201ENST00000619112 90 ntBASIC24.06■■□□□ 1.44
TRANK1O15050 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
TRANK1O15050 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRANK1O15050 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.05■■□□□ 1.44
TRANK1O15050 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
TRANK1O15050 AC009086.3-201ENST00000623486 1008 ntBASIC24.05■■□□□ 1.44
TRANK1O15050 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
TRANK1O15050 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TRANK1O15050 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRANK1O15050 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.05■■□□□ 1.44
TRANK1O15050 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.05■■□□□ 1.44
TRANK1O15050 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRANK1O15050 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
TRANK1O15050 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
TRANK1O15050 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRANK1O15050 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRANK1O15050 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
TRANK1O15050 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.04■■□□□ 1.44
TRANK1O15050 AC142086.2-201ENST00000569753 217 ntBASIC24.04■■□□□ 1.44
TRANK1O15050 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRANK1O15050 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.04■■□□□ 1.44
TRANK1O15050 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRANK1O15050 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
TRANK1O15050 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.03■■□□□ 1.44
TRANK1O15050 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TRANK1O15050 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
TRANK1O15050 TPRG1LP1-201ENST00000598702 760 ntBASIC24.03■■□□□ 1.44
TRANK1O15050 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
TRANK1O15050 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TRANK1O15050 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
TRANK1O15050 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRANK1O15050 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.03■■□□□ 1.44
TRANK1O15050 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.03■■□□□ 1.44
TRANK1O15050 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.03■■□□□ 1.44
TRANK1O15050 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.02■■□□□ 1.44
TRANK1O15050 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.02■■□□□ 1.44
TRANK1O15050 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.02■■□□□ 1.44
TRANK1O15050 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TRANK1O15050 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.02■■□□□ 1.44
TRANK1O15050 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TRANK1O15050 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TRANK1O15050 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.02■■□□□ 1.44
TRANK1O15050 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
TRANK1O15050 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TRANK1O15050 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TRANK1O15050 AC137761.2-201ENST00000561729 223 ntBASIC24.02■■□□□ 1.44
TRANK1O15050 AC145350.3-201ENST00000569033 163 ntBASIC24.02■■□□□ 1.44
TRANK1O15050 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.02■■□□□ 1.44
TRANK1O15050 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.02■■□□□ 1.43
TRANK1O15050 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRANK1O15050 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRANK1O15050 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.01■■□□□ 1.43
TRANK1O15050 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
TRANK1O15050 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
TRANK1O15050 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
TRANK1O15050 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.01■■□□□ 1.43
TRANK1O15050 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.01■■□□□ 1.43
TRANK1O15050 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TRANK1O15050 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRANK1O15050 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRANK1O15050 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24■■□□□ 1.43
TRANK1O15050 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRANK1O15050 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
TRANK1O15050 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRANK1O15050 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24■■□□□ 1.43
TRANK1O15050 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24■■□□□ 1.43
TRANK1O15050 AL355802.2-201ENST00000402069 882 ntBASIC24■■□□□ 1.43
TRANK1O15050 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
TRANK1O15050 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
TRANK1O15050 DBI-210ENST00000542275 757 ntTSL 5 BASIC24■■□□□ 1.43
TRANK1O15050 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRANK1O15050 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TRANK1O15050 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.99■■□□□ 1.43
TRANK1O15050 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRANK1O15050 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.99■■□□□ 1.43
TRANK1O15050 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms