Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH17O14917 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH17O14917 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDH17O14917 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PCDH17O14917 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PCDH17O14917 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDH17O14917 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PCDH17O14917 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH17O14917 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
PCDH17O14917 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDH17O14917 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH17O14917 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH17O14917 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDH17O14917 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDH17O14917 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
PCDH17O14917 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH17O14917 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDH17O14917 SRD5A1P1-201ENST00000442297 786 ntBASIC21.39■■□□□ 1.01
PCDH17O14917 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDH17O14917 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDH17O14917 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDH17O14917 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
PCDH17O14917 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH17O14917 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH17O14917 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH17O14917 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH17O14917 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PCDH17O14917 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH17O14917 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH17O14917 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH17O14917 C9orf163-202ENST00000624034 2573 ntBASIC21.38■■□□□ 1.01
PCDH17O14917 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH17O14917 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH17O14917 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.38■■□□□ 1.01
PCDH17O14917 AC092171.4-201ENST00000609130 632 ntBASIC21.38■■□□□ 1.01
PCDH17O14917 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDH17O14917 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH17O14917 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDH17O14917 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PCDH17O14917 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH17O14917 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
PCDH17O14917 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH17O14917 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH17O14917 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH17O14917 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH17O14917 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH17O14917 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH17O14917 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PCDH17O14917 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH17O14917 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PCDH17O14917 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH17O14917 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH17O14917 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PCDH17O14917 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDH17O14917 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH17O14917 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH17O14917 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH17O14917 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH17O14917 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH17O14917 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.36■■□□□ 1.01
PCDH17O14917 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH17O14917 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH17O14917 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH17O14917 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDH17O14917 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH17O14917 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDH17O14917 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.35■■□□□ 1.01
PCDH17O14917 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDH17O14917 DUX4L19-201ENST00000557448 1267 ntBASIC21.35■■□□□ 1.01
PCDH17O14917 AC133561.4-201ENST00000566112 224 ntBASIC21.35■■□□□ 1.01
PCDH17O14917 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH17O14917 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH17O14917 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH17O14917 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
PCDH17O14917 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDH17O14917 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
PCDH17O14917 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PCDH17O14917 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
PCDH17O14917 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH17O14917 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH17O14917 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH17O14917 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH17O14917 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH17O14917 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH17O14917 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDH17O14917 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PCDH17O14917 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.34■■□□□ 1.01
PCDH17O14917 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH17O14917 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDH17O14917 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDH17O14917 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH17O14917 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH17O14917 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
PCDH17O14917 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDH17O14917 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH17O14917 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDH17O14917 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
PCDH17O14917 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH17O14917 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH17O14917 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms