| WNT9A | O14904 | TRIOBP-203 | ENST00000403663 | 2324 nt | APPRIS ALT2 TSL 1 (best) BASIC | 22.63 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | C1QTNF1-207 | ENST00000580454 | 1396 nt | APPRIS P1 TSL 5 BASIC | 22.63 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | PRMT5-213 | ENST00000553897 | 1857 nt | TSL 2 BASIC | 22.62 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | SPHK1-210 | ENST00000592299 | 1821 nt | APPRIS P3 TSL 1 (best) BASIC | 22.62 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | AL122058.1-201 | ENST00000412321 | 1166 nt | TSL 1 (best) BASIC | 22.62 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | CAMTA1-208 | ENST00000473578 | 567 nt | TSL 1 (best) BASIC | 22.62 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | LGR4-203 | ENST00000480977 | 492 nt | TSL 2 BASIC | 22.62 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | MAG-206 | ENST00000597035 | 542 nt | TSL 4 BASIC | 22.62 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | SLC9A3-203 | ENST00000514375 | 2504 nt | APPRIS ALT2 TSL 1 (best) BASIC | 22.62 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | ID4-201 | ENST00000378700 | 2344 nt | APPRIS P1 TSL 1 (best) BASIC | 22.62 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | TLX1-203 | ENST00000467928 | 1838 nt | TSL 1 (best) BASIC | 22.61 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | PTH1R-201 | ENST00000313049 | 2123 nt | APPRIS P1 TSL 1 (best) BASIC | 22.61 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | PTMA-205 | ENST00000410064 | 814 nt | TSL 2 BASIC | 22.61 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | CROT-202 | ENST00000412227 | 1213 nt | TSL 1 (best) BASIC | 22.61 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | WDR86-AS1-204 | ENST00000489632 | 751 nt | TSL 3 BASIC | 22.61 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | MYBL1-201 | ENST00000517885 | 1714 nt | TSL 5 BASIC | 22.61 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | EI24-213 | ENST00000618552 | 1747 nt | TSL 5 BASIC | 22.61 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | MAZ-201 | ENST00000219782 | 2698 nt | APPRIS P4 TSL 1 (best) BASIC | 22.61 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | SMOX-202 | ENST00000305958 | 2233 nt | APPRIS P1 TSL 1 (best) BASIC | 22.61 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | AL117348.2-201 | ENST00000432920 | 1625 nt | APPRIS P1 TSL 2 BASIC | 22.6 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | C14orf80-206 | ENST00000392527 | 1476 nt | APPRIS ALT2 TSL 1 (best) BASIC | 22.6 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | SMOX-201 | ENST00000278795 | 2164 nt | TSL 1 (best) BASIC | 22.6 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | PCOLCE2-201 | ENST00000295992 | 2021 nt | APPRIS P1 TSL 1 (best) BASIC | 22.6 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | AMZ2P1-201 | ENST00000397713 | 2259 nt | TSL 1 (best) BASIC | 22.6 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | HSPE1-203 | ENST00000409729 | 478 nt | TSL 2 BASIC | 22.6 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | PTCHD3P2-201 | ENST00000424937 | 1205 nt | BASIC | 22.6 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | SLC35A3-216 | ENST00000639221 | 1032 nt | TSL 5 BASIC | 22.6 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | AC004812.2-201 | ENST00000611079 | 2094 nt | BASIC | 22.6 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | RILP-201 | ENST00000301336 | 1771 nt | APPRIS P1 TSL 1 (best) BASIC | 22.6 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | ARFIP2-202 | ENST00000396777 | 1868 nt | APPRIS P1 TSL 2 BASIC | 22.6 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | ACOT1-201 | ENST00000311148 | 1713 nt | APPRIS P1 TSL 1 (best) BASIC | 22.6 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | PTPN2-202 | ENST00000327283 | 1706 nt | APPRIS P1 TSL 1 (best) BASIC | 22.6 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | SLC9A3-201 | ENST00000264938 | 2584 nt | APPRIS P3 TSL 1 (best) BASIC | 22.59 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | C17orf82-201 | ENST00000623772 | 1530 nt | BASIC | 22.59 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | ZNF264-206 | ENST00000600531 | 774 nt | TSL 2 BASIC | 22.59 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | GNAS-201 | ENST00000265620 | 1866 nt | APPRIS P3 TSL 1 (best) BASIC | 22.59 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | SDSL-201 | ENST00000345635 | 1397 nt | APPRIS P1 TSL 1 (best) BASIC | 22.59 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | OAS3-205 | ENST00000548514 | 1392 nt | TSL 2 BASIC | 22.59 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | SIRT3-204 | ENST00000525319 | 1475 nt | APPRIS ALT2 TSL 2 BASIC | 22.59 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | RAB40B-201 | ENST00000269347 | 2189 nt | TSL 2 BASIC | 22.59 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | LINC01116-201 | ENST00000295549 | 1407 nt | TSL 2 BASIC | 22.58 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | CBLN2-209 | ENST00000585159 | 2406 nt | APPRIS P1 TSL 1 (best) BASIC | 22.58 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | AC006455.2-201 | ENST00000429931 | 906 nt | BASIC | 22.58 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | PTX3-201 | ENST00000295927 | 1940 nt | APPRIS P1 TSL 1 (best) BASIC | 22.58 | ■■□□□ 1.21 | | |
| WNT9A | O14904 | MEIS3-201 | ENST00000331559 | 2104 nt | APPRIS ALT2 TSL 5 BASIC | 22.58 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | PRR35-201 | ENST00000409413 | 2216 nt | APPRIS P1 TSL 1 (best) BASIC | 22.58 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | NPAS3-206 | ENST00000548645 | 2926 nt | APPRIS ALT2 TSL 1 (best) BASIC | 22.58 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | UROS-204 | ENST00000368797 | 1313 nt | APPRIS P1 TSL 1 (best) BASIC | 22.57 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | OSCAR-211 | ENST00000617140 | 1547 nt | APPRIS ALT2 TSL 5 BASIC | 22.57 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | AC092171.4-201 | ENST00000609130 | 632 nt | BASIC | 22.57 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | ENKD1-206 | ENST00000602644 | 1353 nt | TSL 5 BASIC | 22.57 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | CBWD2-203 | ENST00000416503 | 1665 nt | APPRIS ALT2 TSL 1 (best) BASIC | 22.57 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | LRRC24-201 | ENST00000529415 | 1758 nt | APPRIS P2 TSL 1 (best) BASIC | 22.57 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | DVL1-201 | ENST00000378888 | 3239 nt | APPRIS ALT1 TSL 5 BASIC | 22.57 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | SPG21-202 | ENST00000416889 | 1533 nt | TSL 2 BASIC | 22.57 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | HOMER2-201 | ENST00000304231 | 1990 nt | APPRIS P4 TSL 5 BASIC | 22.56 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | ACBD4-214 | ENST00000591859 | 1998 nt | TSL 1 (best) BASIC | 22.56 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | PLPP1-202 | ENST00000307259 | 1597 nt | APPRIS ALT1 TSL 1 (best) BASIC | 22.56 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | CENPH-201 | ENST00000283006 | 1389 nt | APPRIS P1 TSL 1 (best) BASIC | 22.56 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | STOML2-201 | ENST00000356493 | 1278 nt | APPRIS P1 TSL 1 (best) BASIC | 22.56 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | AP006621.3-202 | ENST00000530083 | 765 nt | TSL 3 BASIC | 22.56 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | AC093249.6-202 | ENST00000568500 | 1142 nt | TSL 2 BASIC | 22.56 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | GJD3-201 | ENST00000578689 | 885 nt | APPRIS P1 BASIC | 22.56 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | SH2D3A-202 | ENST00000437152 | 2013 nt | TSL 2 BASIC | 22.56 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | KLC3-202 | ENST00000470402 | 1820 nt | TSL 1 (best) BASIC | 22.56 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | PON2-202 | ENST00000433091 | 1726 nt | TSL 1 (best) BASIC | 22.56 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | LEFTY1-201 | ENST00000272134 | 1626 nt | APPRIS P1 TSL 1 (best) BASIC | 22.56 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | MYCBPAP-202 | ENST00000419930 | 1640 nt | APPRIS ALT2 TSL 1 (best) BASIC | 22.56 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | SNUPN-207 | ENST00000567134 | 1641 nt | APPRIS P1 TSL 5 BASIC | 22.56 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | NKX2-3-201 | ENST00000344586 | 2097 nt | APPRIS P1 TSL 2 BASIC | 22.56 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | NAGLU-201 | ENST00000225927 | 2544 nt | APPRIS P1 TSL 1 (best) BASIC | 22.56 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | GATA3-AS1-201 | ENST00000355358 | 2214 nt | TSL 2 BASIC | 22.55 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | ZNF767P-202 | ENST00000472212 | 2100 nt | TSL 1 (best) BASIC | 22.55 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | MAP3K5-201 | ENST00000359015 | 5197 nt | APPRIS P1 TSL 1 (best) BASIC | 22.55 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | HEXDC-202 | ENST00000337014 | 2285 nt | TSL 1 (best) BASIC | 22.55 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | KBTBD13-201 | ENST00000432196 | 1377 nt | APPRIS P1 BASIC | 22.55 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | SCO2-204 | ENST00000543927 | 1051 nt | APPRIS P1 TSL 2 BASIC | 22.55 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | SCAMP3-202 | ENST00000355379 | 1537 nt | TSL 1 (best) BASIC | 22.55 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | GBX2-201 | ENST00000306318 | 2123 nt | APPRIS P1 TSL 1 (best) BASIC | 22.55 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | SNRNP70-201 | ENST00000221448 | 1603 nt | TSL 2 BASIC | 22.54 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | RBM38-205 | ENST00000440234 | 686 nt | TSL 2 BASIC | 22.54 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | AC091305.1-201 | ENST00000479476 | 895 nt | BASIC | 22.54 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | AC004707.1-201 | ENST00000511627 | 715 nt | TSL 3 BASIC | 22.54 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | NKX2-2-AS1-201 | ENST00000549659 | 638 nt | TSL 5 BASIC | 22.54 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | CA15P2-201 | ENST00000611168 | 834 nt | BASIC | 22.54 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | SYNGR3-206 | ENST00000618464 | 1213 nt | TSL 1 (best) BASIC | 22.54 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | UBAP1L-203 | ENST00000559089 | 1694 nt | APPRIS P1 TSL 1 (best) BASIC | 22.54 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | PPP1R1B-201 | ENST00000254079 | 1845 nt | APPRIS P1 TSL 1 (best) BASIC | 22.54 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | UFD1-201 | ENST00000263202 | 1814 nt | APPRIS P1 TSL 1 (best) BASIC | 22.54 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | SYF2-201 | ENST00000236273 | 1345 nt | APPRIS P1 TSL 1 (best) BASIC | 22.54 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | GGTA1P-203 | ENST00000481799 | 1487 nt | TSL 1 (best) BASIC | 22.54 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | NANOS2-201 | ENST00000341294 | 1657 nt | APPRIS P1 BASIC | 22.53 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | NOCT-201 | ENST00000280614 | 1952 nt | APPRIS P1 TSL 1 (best) BASIC | 22.53 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | EIF6-201 | ENST00000374436 | 1252 nt | APPRIS P1 TSL 1 (best) BASIC | 22.53 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | PAFAH1B2-205 | ENST00000529887 | 1056 nt | TSL 1 (best) BASIC | 22.53 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | NRIP3-203 | ENST00000531090 | 980 nt | TSL 2 BASIC | 22.53 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | CAPNS1-207 | ENST00000589146 | 578 nt | TSL 3 BASIC | 22.53 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | PCP4L1-201 | ENST00000504449 | 1424 nt | APPRIS P1 TSL 1 (best) BASIC | 22.53 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | HNRNPAB-201 | ENST00000355836 | 1602 nt | APPRIS ALT2 TSL 1 (best) BASIC | 22.53 | ■■□□□ 1.2 | | |
| WNT9A | O14904 | CBWD1-203 | ENST00000377400 | 1792 nt | APPRIS P1 TSL 1 (best) BASIC | 22.53 | ■■□□□ 1.2 | | |