Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
TRAFD1O14545 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.03■■□□□ 1.28
TRAFD1O14545 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRAFD1O14545 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.03■■□□□ 1.28
TRAFD1O14545 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.03■■□□□ 1.28
TRAFD1O14545 AC004812.2-201ENST00000611079 2094 ntBASIC23.03■■□□□ 1.28
TRAFD1O14545 AL117328.2-201ENST00000624617 1940 ntBASIC23.03■■□□□ 1.28
TRAFD1O14545 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRAFD1O14545 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRAFD1O14545 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRAFD1O14545 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRAFD1O14545 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRAFD1O14545 ALDH1A3-203ENST00000557963 1670 ntBASIC23.03■■□□□ 1.28
TRAFD1O14545 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRAFD1O14545 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TRAFD1O14545 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRAFD1O14545 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
TRAFD1O14545 AL117332.1-201ENST00000622628 974 ntBASIC23.02■■□□□ 1.28
TRAFD1O14545 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.02■■□□□ 1.28
TRAFD1O14545 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TRAFD1O14545 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
TRAFD1O14545 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.01■■□□□ 1.27
TRAFD1O14545 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRAFD1O14545 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRAFD1O14545 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.01■■□□□ 1.27
TRAFD1O14545 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRAFD1O14545 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRAFD1O14545 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.01■■□□□ 1.27
TRAFD1O14545 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRAFD1O14545 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRAFD1O14545 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.01■■□□□ 1.27
TRAFD1O14545 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRAFD1O14545 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
TRAFD1O14545 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23■■□□□ 1.27
TRAFD1O14545 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
TRAFD1O14545 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23■■□□□ 1.27
TRAFD1O14545 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRAFD1O14545 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRAFD1O14545 MIR3621-201ENST00000580529 85 ntBASIC23■■□□□ 1.27
TRAFD1O14545 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRAFD1O14545 AC131212.1-201ENST00000613771 668 ntBASIC23■■□□□ 1.27
TRAFD1O14545 C9orf163-202ENST00000624034 2573 ntBASIC23■■□□□ 1.27
TRAFD1O14545 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
TRAFD1O14545 AC005703.6-201ENST00000623265 1329 ntBASIC23■■□□□ 1.27
TRAFD1O14545 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRAFD1O14545 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRAFD1O14545 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.99■■□□□ 1.27
TRAFD1O14545 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRAFD1O14545 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRAFD1O14545 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.99■■□□□ 1.27
TRAFD1O14545 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.99■■□□□ 1.27
TRAFD1O14545 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.99■■□□□ 1.27
TRAFD1O14545 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRAFD1O14545 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.99■■□□□ 1.27
TRAFD1O14545 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRAFD1O14545 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.99■■□□□ 1.27
TRAFD1O14545 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRAFD1O14545 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
TRAFD1O14545 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TRAFD1O14545 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.98■■□□□ 1.27
TRAFD1O14545 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.98■■□□□ 1.27
TRAFD1O14545 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRAFD1O14545 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRAFD1O14545 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRAFD1O14545 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRAFD1O14545 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.98■■□□□ 1.27
TRAFD1O14545 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.98■■□□□ 1.27
TRAFD1O14545 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.98■■□□□ 1.27
TRAFD1O14545 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.98■■□□□ 1.27
TRAFD1O14545 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRAFD1O14545 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.98■■□□□ 1.27
TRAFD1O14545 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRAFD1O14545 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TRAFD1O14545 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TRAFD1O14545 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
TRAFD1O14545 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
TRAFD1O14545 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TRAFD1O14545 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.97■■□□□ 1.27
TRAFD1O14545 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.97■■□□□ 1.27
TRAFD1O14545 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRAFD1O14545 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.96■■□□□ 1.27
TRAFD1O14545 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRAFD1O14545 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.96■■□□□ 1.27
TRAFD1O14545 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.96■■□□□ 1.27
TRAFD1O14545 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.96■■□□□ 1.27
TRAFD1O14545 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TRAFD1O14545 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRAFD1O14545 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.27
TRAFD1O14545 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
TRAFD1O14545 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.95■■□□□ 1.26
TRAFD1O14545 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
TRAFD1O14545 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.94■■□□□ 1.26
TRAFD1O14545 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TRAFD1O14545 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.94■■□□□ 1.26
TRAFD1O14545 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.94■■□□□ 1.26
TRAFD1O14545 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.94■■□□□ 1.26
TRAFD1O14545 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.94■■□□□ 1.26
TRAFD1O14545 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRAFD1O14545 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.94■■□□□ 1.26
TRAFD1O14545 AL356740.2-201ENST00000601559 647 ntBASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms