Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFRSF11BO00300 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
TNFRSF11BO00300 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TNFRSF11BO00300 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.79■□□□□ 0.92
TNFRSF11BO00300 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
TNFRSF11BO00300 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TNFRSF11BO00300 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.79■□□□□ 0.92
TNFRSF11BO00300 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF11BO00300 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF11BO00300 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF11BO00300 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF11BO00300 LONRF2P2-201ENST00000439212 571 ntBASIC20.78■□□□□ 0.92
TNFRSF11BO00300 DUX4L9-201ENST00000449051 1259 ntBASIC20.78■□□□□ 0.92
TNFRSF11BO00300 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF11BO00300 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF11BO00300 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF11BO00300 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF11BO00300 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.78■□□□□ 0.92
TNFRSF11BO00300 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF11BO00300 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF11BO00300 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF11BO00300 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.77■□□□□ 0.92
TNFRSF11BO00300 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF11BO00300 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF11BO00300 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF11BO00300 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF11BO00300 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.77■□□□□ 0.92
TNFRSF11BO00300 AC011551.1-201ENST00000614101 683 ntBASIC20.77■□□□□ 0.92
TNFRSF11BO00300 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF11BO00300 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TNFRSF11BO00300 ESRRAP2-201ENST00000418437 1549 ntBASIC20.77■□□□□ 0.92
TNFRSF11BO00300 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TNFRSF11BO00300 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
TNFRSF11BO00300 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
TNFRSF11BO00300 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.77■□□□□ 0.91
TNFRSF11BO00300 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
TNFRSF11BO00300 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
TNFRSF11BO00300 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF11BO00300 AC137767.1-201ENST00000602918 1920 ntBASIC20.76■□□□□ 0.91
TNFRSF11BO00300 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF11BO00300 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF11BO00300 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.76■□□□□ 0.91
TNFRSF11BO00300 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF11BO00300 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF11BO00300 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
TNFRSF11BO00300 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF11BO00300 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF11BO00300 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF11BO00300 AC242852.2-201ENST00000615738 1807 ntBASIC20.76■□□□□ 0.91
TNFRSF11BO00300 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.75■□□□□ 0.91
TNFRSF11BO00300 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
TNFRSF11BO00300 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.75■□□□□ 0.91
TNFRSF11BO00300 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF11BO00300 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF11BO00300 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.75■□□□□ 0.91
TNFRSF11BO00300 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF11BO00300 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF11BO00300 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFRSF11BO00300 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TNFRSF11BO00300 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFRSF11BO00300 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFRSF11BO00300 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFRSF11BO00300 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNFRSF11BO00300 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TNFRSF11BO00300 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.74■□□□□ 0.91
TNFRSF11BO00300 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.74■□□□□ 0.91
TNFRSF11BO00300 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TNFRSF11BO00300 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.73■□□□□ 0.91
TNFRSF11BO00300 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF11BO00300 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF11BO00300 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.73■□□□□ 0.91
TNFRSF11BO00300 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF11BO00300 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF11BO00300 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TNFRSF11BO00300 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.73■□□□□ 0.91
TNFRSF11BO00300 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.72■□□□□ 0.91
TNFRSF11BO00300 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFRSF11BO00300 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.72■□□□□ 0.91
TNFRSF11BO00300 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.72■□□□□ 0.91
TNFRSF11BO00300 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFRSF11BO00300 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFRSF11BO00300 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFRSF11BO00300 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.72■□□□□ 0.91
TNFRSF11BO00300 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.72■□□□□ 0.91
TNFRSF11BO00300 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TNFRSF11BO00300 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFRSF11BO00300 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFRSF11BO00300 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFRSF11BO00300 AC079630.1-202ENST00000618127 1840 ntBASIC20.71■□□□□ 0.91
TNFRSF11BO00300 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNFRSF11BO00300 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TNFRSF11BO00300 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.71■□□□□ 0.91
TNFRSF11BO00300 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.71■□□□□ 0.91
TNFRSF11BO00300 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFRSF11BO00300 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNFRSF11BO00300 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.71■□□□□ 0.91
TNFRSF11BO00300 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFRSF11BO00300 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.71■□□□□ 0.91
TNFRSF11BO00300 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.91
TNFRSF11BO00300 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms