Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDLIM1O00151 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDLIM1O00151 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDLIM1O00151 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDLIM1O00151 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.31■■□□□ 1
PDLIM1O00151 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.31■■□□□ 1
PDLIM1O00151 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDLIM1O00151 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDLIM1O00151 SPCS2P3-201ENST00000500401 656 ntBASIC21.31■■□□□ 1
PDLIM1O00151 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
PDLIM1O00151 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.31■■□□□ 1
PDLIM1O00151 ECEL1P1-201ENST00000373592 1742 ntBASIC21.31■■□□□ 1
PDLIM1O00151 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PDLIM1O00151 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.31■■□□□ 1
PDLIM1O00151 FOXO3B-201ENST00000395675 1928 ntBASIC21.31■■□□□ 1
PDLIM1O00151 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDLIM1O00151 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDLIM1O00151 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDLIM1O00151 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.3■■□□□ 1
PDLIM1O00151 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDLIM1O00151 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDLIM1O00151 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDLIM1O00151 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDLIM1O00151 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDLIM1O00151 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PDLIM1O00151 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDLIM1O00151 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PDLIM1O00151 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.29■■□□□ 1
PDLIM1O00151 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
PDLIM1O00151 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
PDLIM1O00151 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.29■■□□□ 1
PDLIM1O00151 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDLIM1O00151 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDLIM1O00151 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDLIM1O00151 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDLIM1O00151 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PDLIM1O00151 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDLIM1O00151 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
PDLIM1O00151 AC004987.1-201ENST00000428627 508 ntBASIC21.28■■□□□ 1
PDLIM1O00151 ATP5G2P3-201ENST00000429083 425 ntBASIC21.28■■□□□ 1
PDLIM1O00151 DUX4L9-201ENST00000449051 1259 ntBASIC21.28■■□□□ 1
PDLIM1O00151 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.28■■□□□ 1
PDLIM1O00151 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDLIM1O00151 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDLIM1O00151 AC073130.3-201ENST00000624389 2278 ntBASIC21.28■■□□□ 1
PDLIM1O00151 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PDLIM1O00151 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.28■■□□□ 1
PDLIM1O00151 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDLIM1O00151 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDLIM1O00151 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PDLIM1O00151 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDLIM1O00151 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
PDLIM1O00151 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDLIM1O00151 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PDLIM1O00151 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
PDLIM1O00151 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDLIM1O00151 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDLIM1O00151 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.27■■□□□ 1
PDLIM1O00151 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PDLIM1O00151 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PDLIM1O00151 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PDLIM1O00151 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PDLIM1O00151 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PDLIM1O00151 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.26■□□□□ 0.99
PDLIM1O00151 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.26■□□□□ 0.99
PDLIM1O00151 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM1O00151 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM1O00151 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PDLIM1O00151 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM1O00151 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM1O00151 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PDLIM1O00151 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PDLIM1O00151 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM1O00151 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.26■□□□□ 0.99
PDLIM1O00151 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM1O00151 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM1O00151 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PDLIM1O00151 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PDLIM1O00151 AL137060.1-201ENST00000618151 2648 ntBASIC21.25■□□□□ 0.99
PDLIM1O00151 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDLIM1O00151 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDLIM1O00151 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.25■□□□□ 0.99
PDLIM1O00151 TSPY13P-201ENST00000338964 914 ntBASIC21.25■□□□□ 0.99
PDLIM1O00151 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.25■□□□□ 0.99
PDLIM1O00151 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.25■□□□□ 0.99
PDLIM1O00151 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.25■□□□□ 0.99
PDLIM1O00151 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PDLIM1O00151 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.24■□□□□ 0.99
PDLIM1O00151 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDLIM1O00151 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDLIM1O00151 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
PDLIM1O00151 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.24■□□□□ 0.99
PDLIM1O00151 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PDLIM1O00151 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDLIM1O00151 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.24■□□□□ 0.99
PDLIM1O00151 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PDLIM1O00151 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
PDLIM1O00151 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDLIM1O00151 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM1O00151 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms