Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.68■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.67■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.67■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.67■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.66■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.66■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.66■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.65■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.65■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.65■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.65■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.65■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.64■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.64■□□□□ 0.74
BOLA2-SMG1P6H3BVE0 AC026471.1-201ENST00000564629 3026 ntBASIC19.64■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.64■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.63■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.63■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.62■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.62■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.61■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.61■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.61■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
BOLA2-SMG1P6H3BVE0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms