Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.4■■□□□ 1.02
C1QTNF9BB2RNN3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.4■■□□□ 1.02
C1QTNF9BB2RNN3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
C1QTNF9BB2RNN3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.4■■□□□ 1.02
C1QTNF9BB2RNN3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
C1QTNF9BB2RNN3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.4■■□□□ 1.02
C1QTNF9BB2RNN3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
C1QTNF9BB2RNN3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
C1QTNF9BB2RNN3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
C1QTNF9BB2RNN3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.39■■□□□ 1.02
C1QTNF9BB2RNN3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.39■■□□□ 1.01
C1QTNF9BB2RNN3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
C1QTNF9BB2RNN3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.39■■□□□ 1.01
C1QTNF9BB2RNN3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.39■■□□□ 1.01
C1QTNF9BB2RNN3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
C1QTNF9BB2RNN3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
C1QTNF9BB2RNN3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
C1QTNF9BB2RNN3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.38■■□□□ 1.01
C1QTNF9BB2RNN3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.38■■□□□ 1.01
C1QTNF9BB2RNN3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.38■■□□□ 1.01
C1QTNF9BB2RNN3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
C1QTNF9BB2RNN3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
C1QTNF9BB2RNN3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
C1QTNF9BB2RNN3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.38■■□□□ 1.01
C1QTNF9BB2RNN3 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.38■■□□□ 1.01
C1QTNF9BB2RNN3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.38■■□□□ 1.01
C1QTNF9BB2RNN3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.38■■□□□ 1.01
C1QTNF9BB2RNN3 AC011767.1-201ENST00000617410 1153 ntBASIC21.38■■□□□ 1.01
C1QTNF9BB2RNN3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
C1QTNF9BB2RNN3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
C1QTNF9BB2RNN3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.38■■□□□ 1.01
C1QTNF9BB2RNN3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
C1QTNF9BB2RNN3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
C1QTNF9BB2RNN3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
C1QTNF9BB2RNN3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.37■■□□□ 1.01
C1QTNF9BB2RNN3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.37■■□□□ 1.01
C1QTNF9BB2RNN3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.37■■□□□ 1.01
C1QTNF9BB2RNN3 AC091060.1-201ENST00000623524 1766 ntBASIC21.37■■□□□ 1.01
C1QTNF9BB2RNN3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
C1QTNF9BB2RNN3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
C1QTNF9BB2RNN3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
C1QTNF9BB2RNN3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.36■■□□□ 1.01
C1QTNF9BB2RNN3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.36■■□□□ 1.01
C1QTNF9BB2RNN3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
C1QTNF9BB2RNN3 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
C1QTNF9BB2RNN3 AP004607.4-201ENST00000530158 1459 ntBASIC21.36■■□□□ 1.01
C1QTNF9BB2RNN3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.36■■□□□ 1.01
C1QTNF9BB2RNN3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
C1QTNF9BB2RNN3 AC004854.2-201ENST00000608450 1441 ntBASIC21.36■■□□□ 1.01
C1QTNF9BB2RNN3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.36■■□□□ 1.01
C1QTNF9BB2RNN3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
C1QTNF9BB2RNN3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
C1QTNF9BB2RNN3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
C1QTNF9BB2RNN3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
C1QTNF9BB2RNN3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
C1QTNF9BB2RNN3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
C1QTNF9BB2RNN3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.35■■□□□ 1.01
C1QTNF9BB2RNN3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
C1QTNF9BB2RNN3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.35■■□□□ 1.01
C1QTNF9BB2RNN3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
C1QTNF9BB2RNN3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
C1QTNF9BB2RNN3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
C1QTNF9BB2RNN3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
C1QTNF9BB2RNN3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
C1QTNF9BB2RNN3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
C1QTNF9BB2RNN3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
C1QTNF9BB2RNN3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.34■■□□□ 1.01
C1QTNF9BB2RNN3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
C1QTNF9BB2RNN3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
C1QTNF9BB2RNN3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
C1QTNF9BB2RNN3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
C1QTNF9BB2RNN3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
C1QTNF9BB2RNN3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
C1QTNF9BB2RNN3 TSPY6P-201ENST00000448518 926 ntBASIC21.33■■□□□ 1.01
C1QTNF9BB2RNN3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.33■■□□□ 1.01
C1QTNF9BB2RNN3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.33■■□□□ 1.01
C1QTNF9BB2RNN3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.33■■□□□ 1.01
C1QTNF9BB2RNN3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
C1QTNF9BB2RNN3 AL121832.2-201ENST00000610979 668 ntBASIC21.33■■□□□ 1.01
C1QTNF9BB2RNN3 AC105233.4-201ENST00000642045 216 ntBASIC21.33■■□□□ 1.01
C1QTNF9BB2RNN3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
C1QTNF9BB2RNN3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
C1QTNF9BB2RNN3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
C1QTNF9BB2RNN3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
C1QTNF9BB2RNN3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
C1QTNF9BB2RNN3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.32■■□□□ 1
C1QTNF9BB2RNN3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
C1QTNF9BB2RNN3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.32■■□□□ 1
C1QTNF9BB2RNN3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.32■■□□□ 1
C1QTNF9BB2RNN3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.32■■□□□ 1
C1QTNF9BB2RNN3 AC083906.2-201ENST00000511578 360 ntBASIC21.32■■□□□ 1
C1QTNF9BB2RNN3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.32■■□□□ 1
C1QTNF9BB2RNN3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.32■■□□□ 1
C1QTNF9BB2RNN3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.32■■□□□ 1
C1QTNF9BB2RNN3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
C1QTNF9BB2RNN3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
C1QTNF9BB2RNN3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
C1QTNF9BB2RNN3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.31■■□□□ 1
C1QTNF9BB2RNN3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.31■■□□□ 1
C1QTNF9BB2RNN3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms