Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYRM9A8MSI8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LYRM9A8MSI8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYRM9A8MSI8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LYRM9A8MSI8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LYRM9A8MSI8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.04■□□□□ 0.16
LYRM9A8MSI8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.04■□□□□ 0.16
LYRM9A8MSI8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.04■□□□□ 0.16
LYRM9A8MSI8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYRM9A8MSI8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LYRM9A8MSI8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.04■□□□□ 0.16
LYRM9A8MSI8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYRM9A8MSI8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LYRM9A8MSI8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYRM9A8MSI8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYRM9A8MSI8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LYRM9A8MSI8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
LYRM9A8MSI8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYRM9A8MSI8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYRM9A8MSI8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
LYRM9A8MSI8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYRM9A8MSI8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.03■□□□□ 0.16
LYRM9A8MSI8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
LYRM9A8MSI8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LYRM9A8MSI8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYRM9A8MSI8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LYRM9A8MSI8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LYRM9A8MSI8 AL136116.3-201ENST00000402907 1138 ntBASIC16.03■□□□□ 0.16
LYRM9A8MSI8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LYRM9A8MSI8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.03■□□□□ 0.16
LYRM9A8MSI8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.03■□□□□ 0.16
LYRM9A8MSI8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.03■□□□□ 0.16
LYRM9A8MSI8 AC144652.1-201ENST00000609974 1624 ntBASIC16.03■□□□□ 0.16
LYRM9A8MSI8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYRM9A8MSI8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.03■□□□□ 0.16
LYRM9A8MSI8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
LYRM9A8MSI8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LYRM9A8MSI8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LYRM9A8MSI8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LYRM9A8MSI8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LYRM9A8MSI8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.02■□□□□ 0.16
LYRM9A8MSI8 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.02■□□□□ 0.16
LYRM9A8MSI8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.02■□□□□ 0.15
LYRM9A8MSI8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.02■□□□□ 0.15
LYRM9A8MSI8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LYRM9A8MSI8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
LYRM9A8MSI8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYRM9A8MSI8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYRM9A8MSI8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYRM9A8MSI8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYRM9A8MSI8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYRM9A8MSI8 DUX4L19-201ENST00000557448 1267 ntBASIC16.01■□□□□ 0.15
LYRM9A8MSI8 MIR4466-201ENST00000606121 54 ntBASIC16.01■□□□□ 0.15
LYRM9A8MSI8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.01■□□□□ 0.15
LYRM9A8MSI8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYRM9A8MSI8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYRM9A8MSI8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYRM9A8MSI8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYRM9A8MSI8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYRM9A8MSI8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYRM9A8MSI8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYRM9A8MSI8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYRM9A8MSI8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYRM9A8MSI8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.01■□□□□ 0.15
LYRM9A8MSI8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LYRM9A8MSI8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LYRM9A8MSI8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LYRM9A8MSI8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16■□□□□ 0.15
LYRM9A8MSI8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LYRM9A8MSI8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYRM9A8MSI8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LYRM9A8MSI8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16■□□□□ 0.15
LYRM9A8MSI8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
LYRM9A8MSI8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LYRM9A8MSI8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16■□□□□ 0.15
LYRM9A8MSI8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16■□□□□ 0.15
LYRM9A8MSI8 LINC01529-204ENST00000636474 1715 ntBASIC15.99■□□□□ 0.15
LYRM9A8MSI8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LYRM9A8MSI8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LYRM9A8MSI8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15.99■□□□□ 0.15
LYRM9A8MSI8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LYRM9A8MSI8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LYRM9A8MSI8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LYRM9A8MSI8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYRM9A8MSI8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYRM9A8MSI8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC15.98■□□□□ 0.15
LYRM9A8MSI8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYRM9A8MSI8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYRM9A8MSI8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.98■□□□□ 0.15
LYRM9A8MSI8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LYRM9A8MSI8 DUX4L4-201ENST00000566884 1269 ntBASIC15.98■□□□□ 0.15
LYRM9A8MSI8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC15.98■□□□□ 0.15
LYRM9A8MSI8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.98■□□□□ 0.15
LYRM9A8MSI8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LYRM9A8MSI8 AC009086.3-201ENST00000623486 1008 ntBASIC15.98■□□□□ 0.15
LYRM9A8MSI8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYRM9A8MSI8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LYRM9A8MSI8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LYRM9A8MSI8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC15.97■□□□□ 0.15
LYRM9A8MSI8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms