Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.69■■□□□ 1.86
TMEM88BA6NKF7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.69■■□□□ 1.86
TMEM88BA6NKF7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.69■■□□□ 1.86
TMEM88BA6NKF7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
TMEM88BA6NKF7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC26.69■■□□□ 1.86
TMEM88BA6NKF7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC26.69■■□□□ 1.86
TMEM88BA6NKF7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC26.69■■□□□ 1.86
TMEM88BA6NKF7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
TMEM88BA6NKF7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.68■■□□□ 1.86
TMEM88BA6NKF7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.68■■□□□ 1.86
TMEM88BA6NKF7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC26.68■■□□□ 1.86
TMEM88BA6NKF7 MIR4651-201ENST00000582622 73 ntBASIC26.68■■□□□ 1.86
TMEM88BA6NKF7 AC011767.1-201ENST00000617410 1153 ntBASIC26.68■■□□□ 1.86
TMEM88BA6NKF7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
TMEM88BA6NKF7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TMEM88BA6NKF7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
TMEM88BA6NKF7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC26.67■■□□□ 1.86
TMEM88BA6NKF7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
TMEM88BA6NKF7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TMEM88BA6NKF7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
TMEM88BA6NKF7 AC004854.2-201ENST00000608450 1441 ntBASIC26.66■■□□□ 1.86
TMEM88BA6NKF7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TMEM88BA6NKF7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TMEM88BA6NKF7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TMEM88BA6NKF7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC26.66■■□□□ 1.86
TMEM88BA6NKF7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC26.66■■□□□ 1.86
TMEM88BA6NKF7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC26.66■■□□□ 1.86
TMEM88BA6NKF7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TMEM88BA6NKF7 MDK-213ENST00000617138 635 ntTSL 2 BASIC26.66■■□□□ 1.86
TMEM88BA6NKF7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TMEM88BA6NKF7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
TMEM88BA6NKF7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TMEM88BA6NKF7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
TMEM88BA6NKF7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TMEM88BA6NKF7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TMEM88BA6NKF7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TMEM88BA6NKF7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TMEM88BA6NKF7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TMEM88BA6NKF7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.65■■□□□ 1.86
TMEM88BA6NKF7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC26.65■■□□□ 1.86
TMEM88BA6NKF7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
TMEM88BA6NKF7 AC133637.1-201ENST00000624115 1537 ntBASIC26.65■■□□□ 1.86
TMEM88BA6NKF7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.65■■□□□ 1.86
TMEM88BA6NKF7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
TMEM88BA6NKF7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
TMEM88BA6NKF7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TMEM88BA6NKF7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC26.64■■□□□ 1.86
TMEM88BA6NKF7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
TMEM88BA6NKF7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC26.64■■□□□ 1.86
TMEM88BA6NKF7 AC010525.1-201ENST00000585559 441 ntBASIC26.64■■□□□ 1.86
TMEM88BA6NKF7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.64■■□□□ 1.85
TMEM88BA6NKF7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.64■■□□□ 1.85
TMEM88BA6NKF7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
TMEM88BA6NKF7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC26.64■■□□□ 1.85
TMEM88BA6NKF7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
TMEM88BA6NKF7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TMEM88BA6NKF7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TMEM88BA6NKF7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC26.63■■□□□ 1.85
TMEM88BA6NKF7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.63■■□□□ 1.85
TMEM88BA6NKF7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
TMEM88BA6NKF7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TMEM88BA6NKF7 DUX4L4-201ENST00000566884 1269 ntBASIC26.63■■□□□ 1.85
TMEM88BA6NKF7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TMEM88BA6NKF7 AC008687.6-201ENST00000596318 630 ntBASIC26.63■■□□□ 1.85
TMEM88BA6NKF7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TMEM88BA6NKF7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC26.63■■□□□ 1.85
TMEM88BA6NKF7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TMEM88BA6NKF7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TMEM88BA6NKF7 AC096887.2-201ENST00000623443 1957 ntBASIC26.62■■□□□ 1.85
TMEM88BA6NKF7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
TMEM88BA6NKF7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
TMEM88BA6NKF7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC26.62■■□□□ 1.85
TMEM88BA6NKF7 KRT19P1-201ENST00000405746 1186 ntBASIC26.62■■□□□ 1.85
TMEM88BA6NKF7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC26.62■■□□□ 1.85
TMEM88BA6NKF7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
TMEM88BA6NKF7 AL121832.2-201ENST00000610979 668 ntBASIC26.62■■□□□ 1.85
TMEM88BA6NKF7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
TMEM88BA6NKF7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TMEM88BA6NKF7 AC139426.1-201ENST00000568218 2529 ntBASIC26.61■■□□□ 1.85
TMEM88BA6NKF7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TMEM88BA6NKF7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TMEM88BA6NKF7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TMEM88BA6NKF7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TMEM88BA6NKF7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
TMEM88BA6NKF7 KRT18P11-201ENST00000435214 1283 ntBASIC26.6■■□□□ 1.85
TMEM88BA6NKF7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC26.6■■□□□ 1.85
TMEM88BA6NKF7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC26.6■■□□□ 1.85
TMEM88BA6NKF7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TMEM88BA6NKF7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.59■■□□□ 1.85
TMEM88BA6NKF7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TMEM88BA6NKF7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TMEM88BA6NKF7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.59■■□□□ 1.85
TMEM88BA6NKF7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
TMEM88BA6NKF7 TSPY6P-201ENST00000448518 926 ntBASIC26.59■■□□□ 1.85
TMEM88BA6NKF7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC26.59■■□□□ 1.85
TMEM88BA6NKF7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TMEM88BA6NKF7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC26.59■■□□□ 1.85
TMEM88BA6NKF7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TMEM88BA6NKF7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
TMEM88BA6NKF7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms