Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RNF222A6NCQ9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF222A6NCQ9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF222A6NCQ9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF222A6NCQ9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF222A6NCQ9 AC080038.3-201ENST00000623346 1952 ntBASIC18.33■□□□□ 0.53
RNF222A6NCQ9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF222A6NCQ9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RNF222A6NCQ9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.33■□□□□ 0.53
RNF222A6NCQ9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.33■□□□□ 0.53
RNF222A6NCQ9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF222A6NCQ9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF222A6NCQ9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF222A6NCQ9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RNF222A6NCQ9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF222A6NCQ9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF222A6NCQ9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF222A6NCQ9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF222A6NCQ9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF222A6NCQ9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF222A6NCQ9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF222A6NCQ9 AC005229.4-201ENST00000610085 2198 ntBASIC18.32■□□□□ 0.52
RNF222A6NCQ9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF222A6NCQ9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF222A6NCQ9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF222A6NCQ9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF222A6NCQ9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF222A6NCQ9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF222A6NCQ9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RNF222A6NCQ9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF222A6NCQ9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF222A6NCQ9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RNF222A6NCQ9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF222A6NCQ9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF222A6NCQ9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF222A6NCQ9 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF222A6NCQ9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF222A6NCQ9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF222A6NCQ9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF222A6NCQ9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF222A6NCQ9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RNF222A6NCQ9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF222A6NCQ9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF222A6NCQ9 RNF165-205ENST00000588679 2904 ntBASIC18.3■□□□□ 0.52
RNF222A6NCQ9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RNF222A6NCQ9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF222A6NCQ9 FAM99A-202ENST00000538190 1989 ntBASIC18.3■□□□□ 0.52
RNF222A6NCQ9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF222A6NCQ9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RNF222A6NCQ9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF222A6NCQ9 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF222A6NCQ9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF222A6NCQ9 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF222A6NCQ9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RNF222A6NCQ9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF222A6NCQ9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF222A6NCQ9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF222A6NCQ9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF222A6NCQ9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF222A6NCQ9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RNF222A6NCQ9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF222A6NCQ9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF222A6NCQ9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF222A6NCQ9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF222A6NCQ9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF222A6NCQ9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF222A6NCQ9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF222A6NCQ9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF222A6NCQ9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
RNF222A6NCQ9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF222A6NCQ9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF222A6NCQ9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF222A6NCQ9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RNF222A6NCQ9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RNF222A6NCQ9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF222A6NCQ9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF222A6NCQ9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF222A6NCQ9 AC087741.3-201ENST00000624270 1347 ntBASIC18.28■□□□□ 0.52
RNF222A6NCQ9 PKD1P6-201ENST00000343738 4769 ntBASIC18.28■□□□□ 0.52
RNF222A6NCQ9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF222A6NCQ9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF222A6NCQ9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RNF222A6NCQ9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF222A6NCQ9 HLA-V-202ENST00000446817 847 ntBASIC18.28■□□□□ 0.52
RNF222A6NCQ9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF222A6NCQ9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF222A6NCQ9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.28■□□□□ 0.52
RNF222A6NCQ9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF222A6NCQ9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF222A6NCQ9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF222A6NCQ9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF222A6NCQ9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF222A6NCQ9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF222A6NCQ9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF222A6NCQ9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF222A6NCQ9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF222A6NCQ9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF222A6NCQ9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF222A6NCQ9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF222A6NCQ9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms