Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHISA3A0PJX4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHISA3A0PJX4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHISA3A0PJX4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHISA3A0PJX4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SHISA3A0PJX4 C11orf96-202ENST00000528572 1834 ntBASIC19.69■□□□□ 0.74
SHISA3A0PJX4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHISA3A0PJX4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.69■□□□□ 0.74
SHISA3A0PJX4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHISA3A0PJX4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.69■□□□□ 0.74
SHISA3A0PJX4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
SHISA3A0PJX4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.69■□□□□ 0.74
SHISA3A0PJX4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHISA3A0PJX4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.69■□□□□ 0.74
SHISA3A0PJX4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SHISA3A0PJX4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHISA3A0PJX4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHISA3A0PJX4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHISA3A0PJX4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.69■□□□□ 0.74
SHISA3A0PJX4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHISA3A0PJX4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SHISA3A0PJX4 FBXW4P1-201ENST00000426721 2239 ntBASIC19.68■□□□□ 0.74
SHISA3A0PJX4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.68■□□□□ 0.74
SHISA3A0PJX4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHISA3A0PJX4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SHISA3A0PJX4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SHISA3A0PJX4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHISA3A0PJX4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
SHISA3A0PJX4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.68■□□□□ 0.74
SHISA3A0PJX4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHISA3A0PJX4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHISA3A0PJX4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.67■□□□□ 0.74
SHISA3A0PJX4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.67■□□□□ 0.74
SHISA3A0PJX4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.67■□□□□ 0.74
SHISA3A0PJX4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.67■□□□□ 0.74
SHISA3A0PJX4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.67■□□□□ 0.74
SHISA3A0PJX4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SHISA3A0PJX4 ALDH1A3-203ENST00000557963 1670 ntBASIC19.67■□□□□ 0.74
SHISA3A0PJX4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHISA3A0PJX4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHISA3A0PJX4 AC079630.1-202ENST00000618127 1840 ntBASIC19.67■□□□□ 0.74
SHISA3A0PJX4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHISA3A0PJX4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.67■□□□□ 0.74
SHISA3A0PJX4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHISA3A0PJX4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHISA3A0PJX4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHISA3A0PJX4 AL022069.1-201ENST00000568025 1636 ntBASIC19.66■□□□□ 0.74
SHISA3A0PJX4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHISA3A0PJX4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHISA3A0PJX4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.66■□□□□ 0.74
SHISA3A0PJX4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.66■□□□□ 0.74
SHISA3A0PJX4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SHISA3A0PJX4 AC092053.2-201ENST00000640557 1818 ntBASIC19.66■□□□□ 0.74
SHISA3A0PJX4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.66■□□□□ 0.74
SHISA3A0PJX4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.66■□□□□ 0.74
SHISA3A0PJX4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SHISA3A0PJX4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHISA3A0PJX4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHISA3A0PJX4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.66■□□□□ 0.74
SHISA3A0PJX4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHISA3A0PJX4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.66■□□□□ 0.74
SHISA3A0PJX4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHISA3A0PJX4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHISA3A0PJX4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHISA3A0PJX4 SLC25A24-204ENST00000569674 2357 ntBASIC19.65■□□□□ 0.74
SHISA3A0PJX4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHISA3A0PJX4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SHISA3A0PJX4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.65■□□□□ 0.74
SHISA3A0PJX4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHISA3A0PJX4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHISA3A0PJX4 AC080038.3-201ENST00000623346 1952 ntBASIC19.65■□□□□ 0.74
SHISA3A0PJX4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHISA3A0PJX4 AC022413.1-201ENST00000624602 984 ntBASIC19.65■□□□□ 0.74
SHISA3A0PJX4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHISA3A0PJX4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SHISA3A0PJX4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SHISA3A0PJX4 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.64■□□□□ 0.74
SHISA3A0PJX4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SHISA3A0PJX4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHISA3A0PJX4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.64■□□□□ 0.73
SHISA3A0PJX4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHISA3A0PJX4 AC131274.2-201ENST00000580697 1507 ntBASIC19.64■□□□□ 0.73
SHISA3A0PJX4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHISA3A0PJX4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHISA3A0PJX4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SHISA3A0PJX4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.64■□□□□ 0.73
SHISA3A0PJX4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHISA3A0PJX4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHISA3A0PJX4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SHISA3A0PJX4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHISA3A0PJX4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SHISA3A0PJX4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.63■□□□□ 0.73
SHISA3A0PJX4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHISA3A0PJX4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHISA3A0PJX4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
SHISA3A0PJX4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHISA3A0PJX4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SHISA3A0PJX4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.63■□□□□ 0.73
SHISA3A0PJX4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHISA3A0PJX4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms