Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV27A0A0K0K1C4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV27A0A0K0K1C4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV27A0A0K0K1C4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV27A0A0K0K1C4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV27A0A0K0K1C4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV27A0A0K0K1C4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC15.91■□□□□ 0.14
TRBV27A0A0K0K1C4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV27A0A0K0K1C4 AC131274.2-201ENST00000580697 1507 ntBASIC15.91■□□□□ 0.14
TRBV27A0A0K0K1C4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV27A0A0K0K1C4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRBV27A0A0K0K1C4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV27A0A0K0K1C4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV27A0A0K0K1C4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV27A0A0K0K1C4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV27A0A0K0K1C4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV27A0A0K0K1C4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV27A0A0K0K1C4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV27A0A0K0K1C4 AC007375.3-201ENST00000600936 2314 ntBASIC15.9■□□□□ 0.14
TRBV27A0A0K0K1C4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRBV27A0A0K0K1C4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV27A0A0K0K1C4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV27A0A0K0K1C4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV27A0A0K0K1C4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
TRBV27A0A0K0K1C4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV27A0A0K0K1C4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV27A0A0K0K1C4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV27A0A0K0K1C4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC15.9■□□□□ 0.14
TRBV27A0A0K0K1C4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV27A0A0K0K1C4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC15.9■□□□□ 0.14
TRBV27A0A0K0K1C4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV27A0A0K0K1C4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV27A0A0K0K1C4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV27A0A0K0K1C4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV27A0A0K0K1C4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC15.9■□□□□ 0.14
TRBV27A0A0K0K1C4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV27A0A0K0K1C4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV27A0A0K0K1C4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV27A0A0K0K1C4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV27A0A0K0K1C4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV27A0A0K0K1C4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV27A0A0K0K1C4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV27A0A0K0K1C4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TRBV27A0A0K0K1C4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV27A0A0K0K1C4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV27A0A0K0K1C4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC15.89■□□□□ 0.13
TRBV27A0A0K0K1C4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV27A0A0K0K1C4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV27A0A0K0K1C4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRBV27A0A0K0K1C4 AC011551.1-201ENST00000614101 683 ntBASIC15.89■□□□□ 0.13
TRBV27A0A0K0K1C4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV27A0A0K0K1C4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC15.89■□□□□ 0.13
TRBV27A0A0K0K1C4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV27A0A0K0K1C4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV27A0A0K0K1C4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC15.89■□□□□ 0.13
TRBV27A0A0K0K1C4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC15.89■□□□□ 0.13
TRBV27A0A0K0K1C4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV27A0A0K0K1C4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV27A0A0K0K1C4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV27A0A0K0K1C4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV27A0A0K0K1C4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV27A0A0K0K1C4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV27A0A0K0K1C4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV27A0A0K0K1C4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRBV27A0A0K0K1C4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV27A0A0K0K1C4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
TRBV27A0A0K0K1C4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC15.88■□□□□ 0.13
TRBV27A0A0K0K1C4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV27A0A0K0K1C4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV27A0A0K0K1C4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV27A0A0K0K1C4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV27A0A0K0K1C4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV27A0A0K0K1C4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
TRBV27A0A0K0K1C4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRBV27A0A0K0K1C4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC15.87■□□□□ 0.13
TRBV27A0A0K0K1C4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV27A0A0K0K1C4 AC092053.2-201ENST00000640557 1818 ntBASIC15.87■□□□□ 0.13
TRBV27A0A0K0K1C4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
TRBV27A0A0K0K1C4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV27A0A0K0K1C4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV27A0A0K0K1C4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV27A0A0K0K1C4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV27A0A0K0K1C4 BID-212ENST00000614949 1988 ntTSL 5 BASIC15.87■□□□□ 0.13
TRBV27A0A0K0K1C4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV27A0A0K0K1C4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV27A0A0K0K1C4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV27A0A0K0K1C4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV27A0A0K0K1C4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV27A0A0K0K1C4 AC079630.1-202ENST00000618127 1840 ntBASIC15.87■□□□□ 0.13
TRBV27A0A0K0K1C4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
TRBV27A0A0K0K1C4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC15.86■□□□□ 0.13
TRBV27A0A0K0K1C4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV27A0A0K0K1C4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV27A0A0K0K1C4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC15.86■□□□□ 0.13
TRBV27A0A0K0K1C4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV27A0A0K0K1C4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRBV27A0A0K0K1C4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV27A0A0K0K1C4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV27A0A0K0K1C4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV27A0A0K0K1C4 GPX1-201ENST00000419349 1106 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms