Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TRBV11-1A0A0K0K1C0 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.85■□□□□ 0.93
TRBV11-1A0A0K0K1C0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV11-1A0A0K0K1C0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.85■□□□□ 0.93
TRBV11-1A0A0K0K1C0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.85■□□□□ 0.93
TRBV11-1A0A0K0K1C0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV11-1A0A0K0K1C0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV11-1A0A0K0K1C0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV11-1A0A0K0K1C0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV11-1A0A0K0K1C0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV11-1A0A0K0K1C0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV11-1A0A0K0K1C0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV11-1A0A0K0K1C0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TRBV11-1A0A0K0K1C0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TRBV11-1A0A0K0K1C0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRBV11-1A0A0K0K1C0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.84■□□□□ 0.93
TRBV11-1A0A0K0K1C0 SERBP1P1-201ENST00000396021 1160 ntBASIC20.84■□□□□ 0.93
TRBV11-1A0A0K0K1C0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.84■□□□□ 0.93
TRBV11-1A0A0K0K1C0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.84■□□□□ 0.93
TRBV11-1A0A0K0K1C0 AC024257.2-201ENST00000549699 147 ntBASIC20.84■□□□□ 0.93
TRBV11-1A0A0K0K1C0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRBV11-1A0A0K0K1C0 AC106739.1-201ENST00000617035 715 ntBASIC20.84■□□□□ 0.93
TRBV11-1A0A0K0K1C0 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.84■□□□□ 0.93
TRBV11-1A0A0K0K1C0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.84■□□□□ 0.93
TRBV11-1A0A0K0K1C0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRBV11-1A0A0K0K1C0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.84■□□□□ 0.93
TRBV11-1A0A0K0K1C0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRBV11-1A0A0K0K1C0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
TRBV11-1A0A0K0K1C0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRBV11-1A0A0K0K1C0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.83■□□□□ 0.93
TRBV11-1A0A0K0K1C0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TRBV11-1A0A0K0K1C0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRBV11-1A0A0K0K1C0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.83■□□□□ 0.93
TRBV11-1A0A0K0K1C0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
TRBV11-1A0A0K0K1C0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
TRBV11-1A0A0K0K1C0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRBV11-1A0A0K0K1C0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRBV11-1A0A0K0K1C0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRBV11-1A0A0K0K1C0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRBV11-1A0A0K0K1C0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
TRBV11-1A0A0K0K1C0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV11-1A0A0K0K1C0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV11-1A0A0K0K1C0 AC019069.1-201ENST00000610008 1333 ntBASIC20.82■□□□□ 0.92
TRBV11-1A0A0K0K1C0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV11-1A0A0K0K1C0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV11-1A0A0K0K1C0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV11-1A0A0K0K1C0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TRBV11-1A0A0K0K1C0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV11-1A0A0K0K1C0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV11-1A0A0K0K1C0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV11-1A0A0K0K1C0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV11-1A0A0K0K1C0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV11-1A0A0K0K1C0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRBV11-1A0A0K0K1C0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRBV11-1A0A0K0K1C0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRBV11-1A0A0K0K1C0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.81■□□□□ 0.92
TRBV11-1A0A0K0K1C0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRBV11-1A0A0K0K1C0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRBV11-1A0A0K0K1C0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TRBV11-1A0A0K0K1C0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
TRBV11-1A0A0K0K1C0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRBV11-1A0A0K0K1C0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
TRBV11-1A0A0K0K1C0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.8■□□□□ 0.92
TRBV11-1A0A0K0K1C0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.8■□□□□ 0.92
TRBV11-1A0A0K0K1C0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.8■□□□□ 0.92
TRBV11-1A0A0K0K1C0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRBV11-1A0A0K0K1C0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRBV11-1A0A0K0K1C0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRBV11-1A0A0K0K1C0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.79■□□□□ 0.92
TRBV11-1A0A0K0K1C0 AC133561.4-201ENST00000566112 224 ntBASIC20.79■□□□□ 0.92
TRBV11-1A0A0K0K1C0 AC005837.3-201ENST00000612163 286 ntBASIC20.79■□□□□ 0.92
TRBV11-1A0A0K0K1C0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRBV11-1A0A0K0K1C0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.78■□□□□ 0.92
TRBV11-1A0A0K0K1C0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV11-1A0A0K0K1C0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV11-1A0A0K0K1C0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV11-1A0A0K0K1C0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
TRBV11-1A0A0K0K1C0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.78■□□□□ 0.92
TRBV11-1A0A0K0K1C0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.78■□□□□ 0.92
TRBV11-1A0A0K0K1C0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRBV11-1A0A0K0K1C0 MIR3181-201ENST00000578512 73 ntBASIC20.78■□□□□ 0.92
TRBV11-1A0A0K0K1C0 AL138724.1-201ENST00000606771 1088 ntBASIC20.78■□□□□ 0.92
TRBV11-1A0A0K0K1C0 pRNA.6-201ENST00000610482 90 ntBASIC20.78■□□□□ 0.92
TRBV11-1A0A0K0K1C0 pRNA.5-201ENST00000612139 90 ntBASIC20.78■□□□□ 0.92
TRBV11-1A0A0K0K1C0 pRNA.11-201ENST00000618423 90 ntBASIC20.78■□□□□ 0.92
TRBV11-1A0A0K0K1C0 pRNA.13-201ENST00000619112 90 ntBASIC20.78■□□□□ 0.92
TRBV11-1A0A0K0K1C0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV11-1A0A0K0K1C0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV11-1A0A0K0K1C0 AC144652.1-201ENST00000609974 1624 ntBASIC20.78■□□□□ 0.92
TRBV11-1A0A0K0K1C0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV11-1A0A0K0K1C0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV11-1A0A0K0K1C0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV11-1A0A0K0K1C0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV11-1A0A0K0K1C0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV11-1A0A0K0K1C0 MIR4767-201ENST00000582827 78 ntBASIC20.77■□□□□ 0.92
TRBV11-1A0A0K0K1C0 AC011298.3-201ENST00000615796 283 ntBASIC20.77■□□□□ 0.92
TRBV11-1A0A0K0K1C0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TRBV11-1A0A0K0K1C0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
TRBV11-1A0A0K0K1C0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV11-1A0A0K0K1C0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms