Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TRAV19A0A0A6YYK7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRAV19A0A0A6YYK7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
TRAV19A0A0A6YYK7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRAV19A0A0A6YYK7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.4■■□□□ 1.34
TRAV19A0A0A6YYK7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRAV19A0A0A6YYK7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
TRAV19A0A0A6YYK7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.4■■□□□ 1.34
TRAV19A0A0A6YYK7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRAV19A0A0A6YYK7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TRAV19A0A0A6YYK7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRAV19A0A0A6YYK7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.39■■□□□ 1.34
TRAV19A0A0A6YYK7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TRAV19A0A0A6YYK7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TRAV19A0A0A6YYK7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRAV19A0A0A6YYK7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRAV19A0A0A6YYK7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRAV19A0A0A6YYK7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRAV19A0A0A6YYK7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.33
TRAV19A0A0A6YYK7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRAV19A0A0A6YYK7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRAV19A0A0A6YYK7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.38■■□□□ 1.33
TRAV19A0A0A6YYK7 AC026271.2-201ENST00000428091 497 ntBASIC23.38■■□□□ 1.33
TRAV19A0A0A6YYK7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRAV19A0A0A6YYK7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.38■■□□□ 1.33
TRAV19A0A0A6YYK7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.38■■□□□ 1.33
TRAV19A0A0A6YYK7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRAV19A0A0A6YYK7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.37■■□□□ 1.33
TRAV19A0A0A6YYK7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.37■■□□□ 1.33
TRAV19A0A0A6YYK7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRAV19A0A0A6YYK7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRAV19A0A0A6YYK7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRAV19A0A0A6YYK7 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.37■■□□□ 1.33
TRAV19A0A0A6YYK7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRAV19A0A0A6YYK7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRAV19A0A0A6YYK7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.36■■□□□ 1.33
TRAV19A0A0A6YYK7 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.36■■□□□ 1.33
TRAV19A0A0A6YYK7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRAV19A0A0A6YYK7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRAV19A0A0A6YYK7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRAV19A0A0A6YYK7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRAV19A0A0A6YYK7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRAV19A0A0A6YYK7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
TRAV19A0A0A6YYK7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRAV19A0A0A6YYK7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRAV19A0A0A6YYK7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
TRAV19A0A0A6YYK7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRAV19A0A0A6YYK7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRAV19A0A0A6YYK7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRAV19A0A0A6YYK7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRAV19A0A0A6YYK7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRAV19A0A0A6YYK7 IRS3P-201ENST00000223076 1006 ntBASIC23.34■■□□□ 1.33
TRAV19A0A0A6YYK7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRAV19A0A0A6YYK7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.34■■□□□ 1.33
TRAV19A0A0A6YYK7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRAV19A0A0A6YYK7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRAV19A0A0A6YYK7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TRAV19A0A0A6YYK7 FP325331.1-202ENST00000623531 1380 ntBASIC23.33■■□□□ 1.33
TRAV19A0A0A6YYK7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.33■■□□□ 1.33
TRAV19A0A0A6YYK7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.33■■□□□ 1.33
TRAV19A0A0A6YYK7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
TRAV19A0A0A6YYK7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.33■■□□□ 1.33
TRAV19A0A0A6YYK7 AC126544.1-201ENST00000580842 1059 ntBASIC23.33■■□□□ 1.33
TRAV19A0A0A6YYK7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.33■■□□□ 1.33
TRAV19A0A0A6YYK7 MIR5787-201ENST00000611784 55 ntBASIC23.33■■□□□ 1.33
TRAV19A0A0A6YYK7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.32
TRAV19A0A0A6YYK7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.33■■□□□ 1.32
TRAV19A0A0A6YYK7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRAV19A0A0A6YYK7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.32■■□□□ 1.32
TRAV19A0A0A6YYK7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRAV19A0A0A6YYK7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.32■■□□□ 1.32
TRAV19A0A0A6YYK7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
TRAV19A0A0A6YYK7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRAV19A0A0A6YYK7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
TRAV19A0A0A6YYK7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRAV19A0A0A6YYK7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRAV19A0A0A6YYK7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
TRAV19A0A0A6YYK7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.31■■□□□ 1.32
TRAV19A0A0A6YYK7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.31■■□□□ 1.32
TRAV19A0A0A6YYK7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.31■■□□□ 1.32
TRAV19A0A0A6YYK7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRAV19A0A0A6YYK7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
TRAV19A0A0A6YYK7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRAV19A0A0A6YYK7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.31■■□□□ 1.32
TRAV19A0A0A6YYK7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRAV19A0A0A6YYK7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRAV19A0A0A6YYK7 AC133637.1-201ENST00000624115 1537 ntBASIC23.3■■□□□ 1.32
TRAV19A0A0A6YYK7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRAV19A0A0A6YYK7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRAV19A0A0A6YYK7 SLC47A1P1-202ENST00000449666 945 ntBASIC23.3■■□□□ 1.32
TRAV19A0A0A6YYK7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.3■■□□□ 1.32
TRAV19A0A0A6YYK7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
TRAV19A0A0A6YYK7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
TRAV19A0A0A6YYK7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRAV19A0A0A6YYK7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.29■■□□□ 1.32
TRAV19A0A0A6YYK7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.29■■□□□ 1.32
TRAV19A0A0A6YYK7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRAV19A0A0A6YYK7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRAV19A0A0A6YYK7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRAV19A0A0A6YYK7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms