Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 AC003686.1-201ENST00000550956 1034 ntBASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 AC025048.6-201ENST00000634326 1161 ntBASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 PCDHB18P-202ENST00000526308 3197 ntBASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 SHMT1P1-201ENST00000419974 1312 ntBASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF6Q9Y4K3 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
TRAF6Q9Y4K3 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.83□□□□□ -0.19
TRAF6Q9Y4K3 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAF6Q9Y4K3 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.83□□□□□ -0.19
TRAF6Q9Y4K3 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRAF6Q9Y4K3 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
TRAF6Q9Y4K3 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.83□□□□□ -0.19
TRAF6Q9Y4K3 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 AL512384.1-201ENST00000406683 331 ntBASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 KLF2P1-201ENST00000447438 1042 ntBASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 AP006547.1-201ENST00000563435 692 ntBASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 AC132938.2-201ENST00000579188 680 ntBASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 MIR4783-201ENST00000580343 82 ntBASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 AC009884.2-201ENST00000603110 324 ntBASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 Z98259.2-201ENST00000641583 609 ntBASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
TRAF6Q9Y4K3 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 AC024075.2-201ENST00000598112 1473 ntBASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAF6Q9Y4K3 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms