Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 AC023830.3-201ENST00000612995 1455 ntBASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 SIRT4-201ENST00000202967 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 DBI-202ENST00000355857 637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 AC010240.1-201ENST00000429606 459 ntBASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 MTND6P14-201ENST00000433044 522 ntBASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 AC034229.1-201ENST00000506299 943 ntTSL 2 BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 IGHVII-33-1-201ENST00000524010 280 ntBASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 AC091544.2-201ENST00000555864 414 ntTSL 3 BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 AC109446.3-201ENST00000567344 641 ntTSL 3 BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 RN7SK-201ENST00000636484 328 ntBASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 RETREG3-203ENST00000585894 1733 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 PRAL-201ENST00000624952 3286 ntBASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 CYP2B7P-201ENST00000541697 1476 ntBASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 CD27-AS1-201ENST00000399492 1094 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 CBWD5-208ENST00000429800 1234 ntTSL 2 BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 AL445933.2-201ENST00000440249 265 ntTSL 2 BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 RN7SL43P-201ENST00000463926 291 ntBASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 LAMTOR4-207ENST00000474141 519 ntTSL 2 BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 AADAC-202ENST00000488869 719 ntTSL 2 BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 FGL1-206ENST00000518650 1093 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 ZBTB25-203ENST00000555424 565 ntTSL 5 BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 PSME1-210ENST00000561435 945 ntTSL 2 BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 AC100830.3-201ENST00000583044 554 ntBASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 OR4C3-202ENST00000611380 597 ntBASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 TTC38-207ENST00000629918 162 ntTSL 5 BASIC21.15■□□□□ 0.98
RIMBP3Q9UFD9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RIMBP3Q9UFD9 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC21.14■□□□□ 0.98
RIMBP3Q9UFD9 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC21.14■□□□□ 0.98
RIMBP3Q9UFD9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
RIMBP3Q9UFD9 AC092295.2-201ENST00000592087 1392 ntBASIC21.14■□□□□ 0.98
RIMBP3Q9UFD9 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC21.14■□□□□ 0.98
RIMBP3Q9UFD9 GPR12-201ENST00000381436 1981 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
RIMBP3Q9UFD9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RIMBP3Q9UFD9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 C17orf75-202ENST00000577809 1642 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 MEF2C-207ENST00000503554 1345 ntTSL 5 BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 CNMD-201ENST00000377962 1410 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 MIA-201ENST00000263369 632 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 RAB13-201ENST00000368575 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 KRTAP19-1-201ENST00000390689 646 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 SUMF1-203ENST00000405420 1128 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 AKIRIN1P2-201ENST00000440655 570 ntBASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 RN7SL255P-201ENST00000470639 296 ntBASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 NDUFA13-204ENST00000507754 991 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 TRIQK-213ENST00000521617 774 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 AC007608.2-201ENST00000569940 1146 ntTSL 3 BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 AC006236.1-201ENST00000576249 797 ntBASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 MIA-203ENST00000594436 507 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 PI4KAP2-201ENST00000360806 2080 ntBASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC21.14■□□□□ 0.97
RIMBP3Q9UFD9 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 GZMH-202ENST00000382548 687 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 SNAPC5-203ENST00000395589 749 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 GAMTP2-201ENST00000430917 463 ntBASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 SOX2-OT-201ENST00000460739 609 ntTSL 4 BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 SNAPC5-205ENST00000563480 920 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 ARHGAP44-212ENST00000616670 884 ntTSL 5 BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 AC012313.9-201ENST00000619318 633 ntBASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 AC121247.1-201ENST00000622888 1232 ntBASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
RIMBP3Q9UFD9 IL17RB-201ENST00000288167 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms