Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 ALG1L3P-201ENST00000503331 765 ntBASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 CES1P2-201ENST00000566467 1242 ntBASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 CYP4F36P-201ENST00000589193 186 ntBASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 AC068760.1-201ENST00000493579 1953 ntBASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 AL139158.3-201ENST00000641212 1562 ntBASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 PSAT1P2-201ENST00000426107 972 ntBASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 AL122018.1-201ENST00000446607 2310 ntBASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 DLK1-205ENST00000556051 469 ntTSL 2 BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 AP005212.2-201ENST00000584979 510 ntBASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 AC010327.5-201ENST00000586923 3061 ntBASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 AL049840.2-201ENST00000602722 535 ntBASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 AC107918.4-201ENST00000641966 3141 ntBASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.62□□□□□ -0.07
DNMT3BQ9UBC3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 AC015909.5-201ENST00000624336 2266 ntBASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC14.61□□□□□ -0.07
DNMT3BQ9UBC3 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms