Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 AC104784.1-201ENST00000473096 294 ntBASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 AP000911.2-201ENST00000534330 502 ntBASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 HERC2P11-201ENST00000562845 725 ntBASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 AC100756.2-201ENST00000569537 736 ntBASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 AC068760.1-201ENST00000493579 1953 ntBASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20BQ9P0W2 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC17.14■□□□□ 0.34
HMG20BQ9P0W2 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 AC010327.5-201ENST00000586923 3061 ntBASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 Z69890.1-201ENST00000382990 339 ntBASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 LINC00265-2P-201ENST00000413372 782 ntBASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 RPL7P35-201ENST00000446943 740 ntBASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 AC007952.4-201ENST00000573866 637 ntBASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 U62317.3-201ENST00000608319 855 ntBASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 AC107464.3-201ENST00000609172 737 ntBASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 AL590824.1-201ENST00000403828 1349 ntBASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 USP39-207ENST00000450066 2086 ntTSL 2 BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC17.14■□□□□ 0.33
HMG20BQ9P0W2 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 KCP-203ENST00000610776 5108 ntTSL 5 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 RNA5SP417-201ENST00000516459 108 ntBASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms