Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 OR10B1P-201ENST00000601666 907 ntBASIC17.45■□□□□ 0.38
UPF2Q9HAU5 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 LAP3P2-201ENST00000454686 1454 ntBASIC17.44■□□□□ 0.38
UPF2Q9HAU5 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 MSTO2P-201ENST00000314835 1709 ntBASIC17.44■□□□□ 0.38
UPF2Q9HAU5 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 PTP4A1P2-201ENST00000546033 454 ntBASIC17.44■□□□□ 0.38
UPF2Q9HAU5 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.44■□□□□ 0.38
UPF2Q9HAU5 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 C2-206ENST00000442278 2434 ntTSL 2 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 AL590824.1-201ENST00000403828 1349 ntBASIC17.44■□□□□ 0.38
UPF2Q9HAU5 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 MSNP1-201ENST00000511640 1732 ntBASIC17.44■□□□□ 0.38
UPF2Q9HAU5 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF2Q9HAU5 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 LINC01165-201ENST00000445190 1623 ntBASIC17.43■□□□□ 0.38
UPF2Q9HAU5 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 KRT18P15-201ENST00000458108 1291 ntBASIC17.43■□□□□ 0.38
UPF2Q9HAU5 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 CHCHD2P3-201ENST00000603038 451 ntBASIC17.43■□□□□ 0.38
UPF2Q9HAU5 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms