Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 ABCD1P2-201ENST00000429313 1601 ntBASIC12.2□□□□□ -0.46
NICN1Q9BSH3 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 MIR770-201ENST00000390219 98 ntBASIC12.2□□□□□ -0.46
NICN1Q9BSH3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 AC236430.1-201ENST00000402231 743 ntBASIC12.2□□□□□ -0.46
NICN1Q9BSH3 PIN1P1-201ENST00000412108 996 ntBASIC12.2□□□□□ -0.46
NICN1Q9BSH3 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 FAM197Y7-201ENST00000432892 766 ntBASIC12.2□□□□□ -0.46
NICN1Q9BSH3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 AL354989.2-201ENST00000435838 1540 ntBASIC12.2□□□□□ -0.46
NICN1Q9BSH3 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.2□□□□□ -0.46
NICN1Q9BSH3 CR383656.2-201ENST00000548656 2254 ntBASIC12.2□□□□□ -0.46
NICN1Q9BSH3 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 AL355102.3-201ENST00000554299 1678 ntBASIC12.19□□□□□ -0.46
NICN1Q9BSH3 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 AC136604.1-202ENST00000425471 771 ntBASIC12.19□□□□□ -0.46
NICN1Q9BSH3 AC002472.2-201ENST00000442739 958 ntBASIC12.19□□□□□ -0.46
NICN1Q9BSH3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 COX5BP1-201ENST00000507622 393 ntBASIC12.19□□□□□ -0.46
NICN1Q9BSH3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 TP53TG3HP-202ENST00000569755 579 ntBASIC12.19□□□□□ -0.46
NICN1Q9BSH3 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 RN7SL713P-201ENST00000582127 302 ntBASIC12.19□□□□□ -0.46
NICN1Q9BSH3 AC008825.2-201ENST00000603374 718 ntBASIC12.19□□□□□ -0.46
NICN1Q9BSH3 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.19□□□□□ -0.46
NICN1Q9BSH3 MKRN5P-201ENST00000445263 1467 ntBASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms