Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC10.82□□□□□ -0.68
VGLL1Q99990 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC10.82□□□□□ -0.68
VGLL1Q99990 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 AC002472.2-201ENST00000442739 958 ntBASIC10.82□□□□□ -0.68
VGLL1Q99990 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC10.82□□□□□ -0.68
VGLL1Q99990 OARD1-208ENST00000469104 704 ntTSL 2 BASIC10.82□□□□□ -0.68
VGLL1Q99990 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
VGLL1Q99990 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC10.82□□□□□ -0.68
VGLL1Q99990 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
VGLL1Q99990 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC10.82□□□□□ -0.68
VGLL1Q99990 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
VGLL1Q99990 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
VGLL1Q99990 TP53TG3HP-202ENST00000569755 579 ntBASIC10.82□□□□□ -0.68
VGLL1Q99990 MIR4745-201ENST00000577608 62 ntBASIC10.82□□□□□ -0.68
VGLL1Q99990 PIGL-212ENST00000581006 554 ntTSL 4 BASIC10.82□□□□□ -0.68
VGLL1Q99990 KRT18P8-201ENST00000581937 1246 ntBASIC10.82□□□□□ -0.68
VGLL1Q99990 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC10.82□□□□□ -0.68
VGLL1Q99990 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
VGLL1Q99990 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC10.82□□□□□ -0.68
VGLL1Q99990 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
VGLL1Q99990 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC10.82□□□□□ -0.68
VGLL1Q99990 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC10.82□□□□□ -0.68
VGLL1Q99990 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC10.82□□□□□ -0.68
VGLL1Q99990 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
VGLL1Q99990 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
VGLL1Q99990 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC10.82□□□□□ -0.68
VGLL1Q99990 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC10.82□□□□□ -0.68
VGLL1Q99990 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC10.82□□□□□ -0.68
VGLL1Q99990 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
VGLL1Q99990 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC10.82□□□□□ -0.68
VGLL1Q99990 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC10.82□□□□□ -0.68
VGLL1Q99990 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
VGLL1Q99990 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC10.82□□□□□ -0.68
VGLL1Q99990 PCDHA6-201ENST00000378126 3267 ntBASIC10.82□□□□□ -0.68
VGLL1Q99990 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
VGLL1Q99990 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
VGLL1Q99990 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
VGLL1Q99990 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC10.81□□□□□ -0.68
VGLL1Q99990 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC10.81□□□□□ -0.68
VGLL1Q99990 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
VGLL1Q99990 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC10.81□□□□□ -0.68
VGLL1Q99990 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
VGLL1Q99990 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC10.81□□□□□ -0.68
VGLL1Q99990 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC10.81□□□□□ -0.68
VGLL1Q99990 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC10.81□□□□□ -0.68
VGLL1Q99990 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
VGLL1Q99990 ZBTB12BP-201ENST00000314232 1122 ntBASIC10.81□□□□□ -0.68
VGLL1Q99990 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
VGLL1Q99990 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
VGLL1Q99990 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
VGLL1Q99990 C2orf27AP3-201ENST00000434123 579 ntBASIC10.81□□□□□ -0.68
VGLL1Q99990 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC10.81□□□□□ -0.68
VGLL1Q99990 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC10.81□□□□□ -0.68
VGLL1Q99990 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC10.81□□□□□ -0.68
VGLL1Q99990 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC10.81□□□□□ -0.68
VGLL1Q99990 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
VGLL1Q99990 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC10.81□□□□□ -0.68
VGLL1Q99990 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC10.81□□□□□ -0.68
VGLL1Q99990 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC10.81□□□□□ -0.68
VGLL1Q99990 AL358472.3-201ENST00000608147 415 ntBASIC10.81□□□□□ -0.68
VGLL1Q99990 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC10.81□□□□□ -0.68
VGLL1Q99990 AL354718.3-201ENST00000616414 581 ntBASIC10.81□□□□□ -0.68
VGLL1Q99990 CR382287.1-201ENST00000623954 586 ntBASIC10.81□□□□□ -0.68
VGLL1Q99990 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC10.81□□□□□ -0.68
VGLL1Q99990 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms