Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 MIR645-201ENST00000385283 94 ntBASIC12.42□□□□□ -0.42
TMEM54Q969K7 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 AC026320.2-201ENST00000434379 478 ntBASIC12.42□□□□□ -0.42
TMEM54Q969K7 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 AC012618.1-201ENST00000461223 412 ntBASIC12.42□□□□□ -0.42
TMEM54Q969K7 AC008723.1-201ENST00000506922 207 ntBASIC12.42□□□□□ -0.42
TMEM54Q969K7 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 ACTG1P17-201ENST00000558391 1119 ntBASIC12.42□□□□□ -0.42
TMEM54Q969K7 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 AC026803.1-201ENST00000569130 274 ntBASIC12.42□□□□□ -0.42
TMEM54Q969K7 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.41□□□□□ -0.42
TMEM54Q969K7 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.41□□□□□ -0.42
TMEM54Q969K7 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
TMEM54Q969K7 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.41□□□□□ -0.42
TMEM54Q969K7 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 ST20-AS1-201ENST00000560255 4223 ntBASIC12.41□□□□□ -0.42
TMEM54Q969K7 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.41□□□□□ -0.42
TMEM54Q969K7 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 AC105206.1-202ENST00000314927 2368 ntBASIC12.41□□□□□ -0.42
TMEM54Q969K7 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.41□□□□□ -0.42
TMEM54Q969K7 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.41□□□□□ -0.42
TMEM54Q969K7 PPP1R2P4-201ENST00000424051 595 ntBASIC12.41□□□□□ -0.42
TMEM54Q969K7 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.41□□□□□ -0.42
TMEM54Q969K7 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.41□□□□□ -0.42
TMEM54Q969K7 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.41□□□□□ -0.42
TMEM54Q969K7 AL353637.1-201ENST00000451571 732 ntBASIC12.41□□□□□ -0.42
TMEM54Q969K7 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.41□□□□□ -0.42
TMEM54Q969K7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.41□□□□□ -0.42
TMEM54Q969K7 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.41□□□□□ -0.42
TMEM54Q969K7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.41□□□□□ -0.42
TMEM54Q969K7 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.41□□□□□ -0.42
TMEM54Q969K7 AC103810.3-201ENST00000583567 96 ntBASIC12.41□□□□□ -0.42
TMEM54Q969K7 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.41□□□□□ -0.42
TMEM54Q969K7 AL161773.1-201ENST00000624845 863 ntBASIC12.41□□□□□ -0.42
TMEM54Q969K7 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
TMEM54Q969K7 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
TMEM54Q969K7 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TMEM54Q969K7 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TMEM54Q969K7 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TMEM54Q969K7 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TMEM54Q969K7 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
TMEM54Q969K7 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.41□□□□□ -0.42
TMEM54Q969K7 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TMEM54Q969K7 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TMEM54Q969K7 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TMEM54Q969K7 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TMEM54Q969K7 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TMEM54Q969K7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.4□□□□□ -0.42
TMEM54Q969K7 AC020917.4-201ENST00000623994 1999 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms