Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12□□□□□ -0.49
RTN4IP1Q8WWV3 GOLGA8EP-201ENST00000530246 1959 ntBASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 CSPG4P11-201ENST00000560634 4910 ntBASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 KLF2P4-201ENST00000451959 1225 ntBASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 AC079316.1-201ENST00000548397 411 ntBASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 RAB43P1-201ENST00000561790 589 ntBASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 MKRN5P-201ENST00000445263 1467 ntBASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 F2-205ENST00000530231 1849 ntTSL 5 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
RTN4IP1Q8WWV3 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 KRT8P28-201ENST00000433288 1390 ntBASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 AL136309.1-201ENST00000403917 691 ntBASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 AC112492.5-201ENST00000421897 457 ntBASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 U91328.1-201ENST00000437528 223 ntBASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 AK2P2-201ENST00000439142 405 ntBASIC11.98□□□□□ -0.49
RTN4IP1Q8WWV3 CTBP2P5-201ENST00000454986 1264 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms