Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.55□□□□□ -0.08
NPAS3Q8IXF0 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
NPAS3Q8IXF0 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS3Q8IXF0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.55□□□□□ -0.08
NPAS3Q8IXF0 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NPAS3Q8IXF0 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS3Q8IXF0 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.55□□□□□ -0.08
NPAS3Q8IXF0 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS3Q8IXF0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
NPAS3Q8IXF0 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS3Q8IXF0 AC090505.1-201ENST00000430515 1834 ntBASIC14.55□□□□□ -0.08
NPAS3Q8IXF0 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPAS3Q8IXF0 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 AC140479.7-201ENST00000636301 2332 ntBASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 AC005912.2-201ENST00000619492 2400 ntBASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 HMGA1P1-201ENST00000415560 1062 ntBASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 HLA-DPA2-205ENST00000433582 733 ntBASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 GALP-202ENST00000440823 889 ntTSL 5 BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 CISD2-202ENST00000503643 808 ntTSL 2 BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 GDNF-207ENST00000515058 764 ntTSL 5 BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 SRP14-204ENST00000558720 780 ntTSL 2 BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 EIF5AP2-201ENST00000585668 1047 ntBASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 AP003392.6-201ENST00000607709 325 ntBASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 AL590824.1-201ENST00000403828 1349 ntBASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NPAS3Q8IXF0 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 PTGER4P2-201ENST00000328411 252 ntBASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 SSR4-202ENST00000370085 526 ntTSL 2 BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 ABCD1P4-201ENST00000399687 604 ntBASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 AL512599.1-201ENST00000430724 685 ntBASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 PTGER4P3-201ENST00000458150 252 ntBASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 AL049840.2-201ENST00000602722 535 ntBASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 AP001527.2-201ENST00000614441 631 ntBASIC14.53□□□□□ -0.08
NPAS3Q8IXF0 AP000769.1-203ENST00000637245 208 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms