Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 NHP2P1-201ENST00000335274 462 ntBASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 ACTG1P19-201ENST00000418987 1116 ntBASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 AC068831.5-201ENST00000557387 328 ntBASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 AC090386.2-201ENST00000623010 1039 ntBASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 AC009093.10-201ENST00000641956 1442 ntBASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 LINC00265-2P-201ENST00000413372 782 ntBASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 SNORD3B-1-201ENST00000577988 758 ntBASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 AC021305.1-201ENST00000520656 1514 ntBASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 AC067931.2-201ENST00000623655 2003 ntBASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 ANKRD20A3-201ENST00000611388 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RP1L1Q8IWN7 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 SCARNA12-201ENST00000459155 270 ntBASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 RN7SL582P-201ENST00000491078 279 ntBASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 AC010976.2-201ENST00000609697 852 ntBASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 CR392039.1-201ENST00000623217 204 ntBASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 AC013268.4-201ENST00000637413 2228 ntBASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 HOXA-AS3-202ENST00000518947 3992 ntTSL 2 BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 BRD7P5-201ENST00000299197 1822 ntBASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 KRT8P28-201ENST00000433288 1390 ntBASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RP1L1Q8IWN7 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms