Protein–RNA interactions for Protein: P61018

RAB4B, Ras-related protein Rab-4B, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4BP61018 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 PER1-202ENST00000354903 3115 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB4BP61018 AC087164.2-201ENST00000624514 3130 ntBASIC11.11□□□□□ -0.63
RAB4BP61018 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
RAB4BP61018 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 BDP1-201ENST00000358731 11073 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC11.11□□□□□ -0.63
RAB4BP61018 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
RAB4BP61018 NFATC4-209ENST00000553879 2707 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
RAB4BP61018 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
RAB4BP61018 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB4BP61018 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 CLEC4F-201ENST00000272367 2475 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
RAB4BP61018 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 PARG-207ENST00000616448 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
RAB4BP61018 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.11□□□□□ -0.63
RAB4BP61018 AC011840.2-201ENST00000563063 1520 ntBASIC11.11□□□□□ -0.63
RAB4BP61018 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC11.11□□□□□ -0.63
RAB4BP61018 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
RAB4BP61018 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
RAB4BP61018 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
RAB4BP61018 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
RAB4BP61018 TEX30-205ENST00000376029 959 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB4BP61018 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
RAB4BP61018 AC104457.1-201ENST00000401024 814 ntBASIC11.11□□□□□ -0.63
RAB4BP61018 AC005237.2-201ENST00000434368 219 ntBASIC11.11□□□□□ -0.63
RAB4BP61018 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC11.11□□□□□ -0.63
RAB4BP61018 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.11□□□□□ -0.63
RAB4BP61018 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
RAB4BP61018 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.11□□□□□ -0.63
RAB4BP61018 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB4BP61018 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB4BP61018 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC11.11□□□□□ -0.63
RAB4BP61018 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11.11□□□□□ -0.63
RAB4BP61018 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC11.11□□□□□ -0.63
RAB4BP61018 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB4BP61018 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
RAB4BP61018 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB4BP61018 AL035456.1-201ENST00000456064 1369 ntBASIC11.11□□□□□ -0.63
RAB4BP61018 CARS-214ENST00000529772 2637 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB4BP61018 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC11.11□□□□□ -0.63
RAB4BP61018 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 TGOLN2-202ENST00000377386 6489 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 GOLGA8CP-201ENST00000446144 5237 ntBASIC11.11□□□□□ -0.63
RAB4BP61018 CLK3P2-201ENST00000427566 1453 ntBASIC11.11□□□□□ -0.63
RAB4BP61018 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.11□□□□□ -0.63
RAB4BP61018 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
RAB4BP61018 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB4BP61018 AP3S2-201ENST00000336418 5891 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC11.11□□□□□ -0.63
RAB4BP61018 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
RAB4BP61018 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4BP61018 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
RAB4BP61018 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4BP61018 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC11.1□□□□□ -0.63
RAB4BP61018 OLFML2A-201ENST00000288815 5964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4BP61018 CASZ1-201ENST00000344008 4405 ntTSL 2 BASIC11.1□□□□□ -0.63
RAB4BP61018 SPTBN5-201ENST00000320955 11725 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4BP61018 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4BP61018 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
RAB4BP61018 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
RAB4BP61018 CD99L2-203ENST00000370377 3604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4BP61018 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4BP61018 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
RAB4BP61018 PLEKHG4-204ENST00000427155 4455 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
RAB4BP61018 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4BP61018 YPEL2-201ENST00000312655 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4BP61018 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.1□□□□□ -0.63
RAB4BP61018 RGS8-201ENST00000258302 5606 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4BP61018 TCF4-202ENST00000356073 8317 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4BP61018 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
RAB4BP61018 C9orf3-203ENST00000375315 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4BP61018 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4BP61018 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
RAB4BP61018 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC11.1□□□□□ -0.63
RAB4BP61018 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC11.1□□□□□ -0.63
RAB4BP61018 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4BP61018 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RAB4BP61018 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms