Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT9P35527 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KRT9P35527 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
KRT9P35527 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT9P35527 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT9P35527 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.54■□□□□ 0.08
KRT9P35527 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT9P35527 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT9P35527 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT9P35527 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT9P35527 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT9P35527 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT9P35527 TNN-202ENST00000621086 4234 ntTSL 5 BASIC15.54■□□□□ 0.08
KRT9P35527 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT9P35527 AL008718.2-201ENST00000609206 1313 ntBASIC15.54■□□□□ 0.08
KRT9P35527 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
KRT9P35527 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
KRT9P35527 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
KRT9P35527 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT9P35527 AC099336.1-201ENST00000417053 1171 ntBASIC15.54■□□□□ 0.08
KRT9P35527 AC079178.1-201ENST00000420915 656 ntBASIC15.54■□□□□ 0.08
KRT9P35527 AC136604.1-202ENST00000425471 771 ntBASIC15.54■□□□□ 0.08
KRT9P35527 ST13P19-201ENST00000442505 1124 ntBASIC15.54■□□□□ 0.08
KRT9P35527 AC022210.1-201ENST00000449856 793 ntBASIC15.54■□□□□ 0.08
KRT9P35527 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT9P35527 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT9P35527 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC15.54■□□□□ 0.08
KRT9P35527 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT9P35527 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.54■□□□□ 0.08
KRT9P35527 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.54■□□□□ 0.08
KRT9P35527 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.54■□□□□ 0.08
KRT9P35527 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.54■□□□□ 0.08
KRT9P35527 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
KRT9P35527 AC021016.3-201ENST00000608367 477 ntBASIC15.54■□□□□ 0.08
KRT9P35527 CR392039.2-201ENST00000623182 509 ntBASIC15.54■□□□□ 0.08
KRT9P35527 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.54■□□□□ 0.08
KRT9P35527 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.54■□□□□ 0.08
KRT9P35527 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT9P35527 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
KRT9P35527 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT9P35527 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT9P35527 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT9P35527 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT9P35527 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT9P35527 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT9P35527 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT9P35527 AL355102.3-201ENST00000554299 1678 ntBASIC15.54■□□□□ 0.08
KRT9P35527 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
KRT9P35527 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT9P35527 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
KRT9P35527 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 MKRN5P-201ENST00000445263 1467 ntBASIC15.53■□□□□ 0.08
KRT9P35527 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
KRT9P35527 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC15.53■□□□□ 0.08
KRT9P35527 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
KRT9P35527 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
KRT9P35527 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.53■□□□□ 0.08
KRT9P35527 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
KRT9P35527 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.53■□□□□ 0.08
KRT9P35527 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 KRT18P15-201ENST00000458108 1291 ntBASIC15.53■□□□□ 0.08
KRT9P35527 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.53■□□□□ 0.08
KRT9P35527 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.53■□□□□ 0.08
KRT9P35527 MIR4741-201ENST00000579822 90 ntBASIC15.53■□□□□ 0.08
KRT9P35527 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 AC132192.2-201ENST00000596206 1147 ntBASIC15.53■□□□□ 0.08
KRT9P35527 COX11-210ENST00000639671 696 ntBASIC15.53■□□□□ 0.08
KRT9P35527 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
KRT9P35527 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC15.53■□□□□ 0.08
KRT9P35527 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.53■□□□□ 0.08
KRT9P35527 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT9P35527 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
KRT9P35527 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.53■□□□□ 0.08
KRT9P35527 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.52■□□□□ 0.08
KRT9P35527 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT9P35527 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.52■□□□□ 0.08
KRT9P35527 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.52■□□□□ 0.08
KRT9P35527 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
KRT9P35527 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
KRT9P35527 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.52■□□□□ 0.08
KRT9P35527 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms