Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CPS1P31327 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.28■□□□□ 0.68
CPS1P31327 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPS1P31327 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPS1P31327 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPS1P31327 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CPS1P31327 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPS1P31327 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CPS1P31327 AL121994.1-201ENST00000413189 402 ntBASIC19.28■□□□□ 0.68
CPS1P31327 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CPS1P31327 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC19.28■□□□□ 0.68
CPS1P31327 CHCHD2P6-201ENST00000454346 447 ntBASIC19.28■□□□□ 0.68
CPS1P31327 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC19.28■□□□□ 0.68
CPS1P31327 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC19.28■□□□□ 0.68
CPS1P31327 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC19.28■□□□□ 0.68
CPS1P31327 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CPS1P31327 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPS1P31327 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC19.28■□□□□ 0.68
CPS1P31327 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CPS1P31327 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CPS1P31327 AC015813.5-201ENST00000624641 1514 ntBASIC19.28■□□□□ 0.68
CPS1P31327 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC19.28■□□□□ 0.68
CPS1P31327 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPS1P31327 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPS1P31327 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.27■□□□□ 0.68
CPS1P31327 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPS1P31327 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPS1P31327 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPS1P31327 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPS1P31327 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPS1P31327 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CPS1P31327 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC19.27■□□□□ 0.68
CPS1P31327 POLR3DP1-201ENST00000398689 1176 ntBASIC19.27■□□□□ 0.68
CPS1P31327 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPS1P31327 RN7SL340P-201ENST00000470792 296 ntBASIC19.27■□□□□ 0.68
CPS1P31327 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC19.27■□□□□ 0.68
CPS1P31327 RN7SL477P-201ENST00000488440 286 ntBASIC19.27■□□□□ 0.68
CPS1P31327 RPL29P2-202ENST00000498671 657 ntBASIC19.27■□□□□ 0.68
CPS1P31327 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPS1P31327 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC19.27■□□□□ 0.68
CPS1P31327 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPS1P31327 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPS1P31327 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPS1P31327 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPS1P31327 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CPS1P31327 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPS1P31327 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CPS1P31327 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPS1P31327 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC19.27■□□□□ 0.67
CPS1P31327 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CPS1P31327 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPS1P31327 HSPA7-201ENST00000445535 1927 ntBASIC19.27■□□□□ 0.67
CPS1P31327 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC19.27■□□□□ 0.67
CPS1P31327 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPS1P31327 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.26■□□□□ 0.67
CPS1P31327 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CPS1P31327 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CPS1P31327 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC19.26■□□□□ 0.67
CPS1P31327 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC19.26■□□□□ 0.67
CPS1P31327 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPS1P31327 RBMXP1-201ENST00000408004 1191 ntBASIC19.26■□□□□ 0.67
CPS1P31327 AP001331.1-201ENST00000413008 1015 ntBASIC19.26■□□□□ 0.67
CPS1P31327 HLA-DQB3-203ENST00000425319 356 ntBASIC19.26■□□□□ 0.67
CPS1P31327 AC105443.1-201ENST00000433754 712 ntBASIC19.26■□□□□ 0.67
CPS1P31327 AL137077.1-201ENST00000442115 528 ntBASIC19.26■□□□□ 0.67
CPS1P31327 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC19.26■□□□□ 0.67
CPS1P31327 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC19.26■□□□□ 0.67
CPS1P31327 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC19.26■□□□□ 0.67
CPS1P31327 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC19.26■□□□□ 0.67
CPS1P31327 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC19.26■□□□□ 0.67
CPS1P31327 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC19.26■□□□□ 0.67
CPS1P31327 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CPS1P31327 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CPS1P31327 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC19.26■□□□□ 0.67
CPS1P31327 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPS1P31327 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPS1P31327 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPS1P31327 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPS1P31327 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CPS1P31327 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPS1P31327 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPS1P31327 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CPS1P31327 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC19.26■□□□□ 0.67
CPS1P31327 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.26■□□□□ 0.67
CPS1P31327 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.26■□□□□ 0.67
CPS1P31327 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC19.26■□□□□ 0.67
CPS1P31327 KRT8P42-201ENST00000405771 1399 ntBASIC19.26■□□□□ 0.67
CPS1P31327 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPS1P31327 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPS1P31327 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC19.26■□□□□ 0.67
CPS1P31327 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPS1P31327 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPS1P31327 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPS1P31327 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPS1P31327 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPS1P31327 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPS1P31327 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPS1P31327 RER1-203ENST00000378513 3000 ntTSL 3 BASIC19.25■□□□□ 0.67
CPS1P31327 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CPS1P31327 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms