Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HTR1EP28566 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.63□□□□□ -0.23
HTR1EP28566 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HTR1EP28566 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.63□□□□□ -0.23
HTR1EP28566 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HTR1EP28566 RN7SKP175-201ENST00000408472 289 ntBASIC13.63□□□□□ -0.23
HTR1EP28566 AL590640.2-201ENST00000457038 527 ntBASIC13.63□□□□□ -0.23
HTR1EP28566 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
HTR1EP28566 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HTR1EP28566 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.63□□□□□ -0.23
HTR1EP28566 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.63□□□□□ -0.23
HTR1EP28566 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.63□□□□□ -0.23
HTR1EP28566 NDUFV2P1-201ENST00000596415 907 ntBASIC13.63□□□□□ -0.23
HTR1EP28566 AL096828.3-201ENST00000615354 462 ntBASIC13.63□□□□□ -0.23
HTR1EP28566 AC006453.4-201ENST00000636949 1252 ntBASIC13.63□□□□□ -0.23
HTR1EP28566 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
HTR1EP28566 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HTR1EP28566 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HTR1EP28566 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.63□□□□□ -0.23
HTR1EP28566 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HTR1EP28566 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HTR1EP28566 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HTR1EP28566 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HTR1EP28566 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HTR1EP28566 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HTR1EP28566 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HTR1EP28566 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.63□□□□□ -0.23
HTR1EP28566 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HTR1EP28566 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.63□□□□□ -0.23
HTR1EP28566 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HTR1EP28566 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HTR1EP28566 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HTR1EP28566 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HTR1EP28566 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HTR1EP28566 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HTR1EP28566 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HTR1EP28566 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HTR1EP28566 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HTR1EP28566 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.62□□□□□ -0.23
HTR1EP28566 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HTR1EP28566 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HTR1EP28566 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HTR1EP28566 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HTR1EP28566 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HTR1EP28566 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HTR1EP28566 AP000437.1-201ENST00000624057 2085 ntBASIC13.62□□□□□ -0.23
HTR1EP28566 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HTR1EP28566 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HTR1EP28566 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.62□□□□□ -0.23
HTR1EP28566 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HTR1EP28566 PCDHB18P-202ENST00000526308 3197 ntBASIC13.62□□□□□ -0.23
HTR1EP28566 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HTR1EP28566 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
HTR1EP28566 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HTR1EP28566 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.62□□□□□ -0.23
HTR1EP28566 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.62□□□□□ -0.23
HTR1EP28566 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.62□□□□□ -0.23
HTR1EP28566 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.62□□□□□ -0.23
HTR1EP28566 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HTR1EP28566 AL391280.1-201ENST00000506969 1062 ntBASIC13.62□□□□□ -0.23
HTR1EP28566 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
HTR1EP28566 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.62□□□□□ -0.23
HTR1EP28566 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.62□□□□□ -0.23
HTR1EP28566 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.62□□□□□ -0.23
HTR1EP28566 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.62□□□□□ -0.23
HTR1EP28566 AC138627.1-207ENST00000641560 1006 ntBASIC13.62□□□□□ -0.23
HTR1EP28566 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HTR1EP28566 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HTR1EP28566 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HTR1EP28566 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HTR1EP28566 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HTR1EP28566 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
HTR1EP28566 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HTR1EP28566 AL138709.1-201ENST00000614840 1693 ntBASIC13.62□□□□□ -0.23
HTR1EP28566 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HTR1EP28566 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HTR1EP28566 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.62□□□□□ -0.23
HTR1EP28566 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
HTR1EP28566 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HTR1EP28566 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.62□□□□□ -0.23
HTR1EP28566 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.62□□□□□ -0.23
HTR1EP28566 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HTR1EP28566 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HTR1EP28566 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.61□□□□□ -0.23
HTR1EP28566 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HTR1EP28566 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.61□□□□□ -0.23
HTR1EP28566 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HTR1EP28566 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HTR1EP28566 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
HTR1EP28566 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HTR1EP28566 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HTR1EP28566 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HTR1EP28566 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HTR1EP28566 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HTR1EP28566 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HTR1EP28566 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.61□□□□□ -0.23
HTR1EP28566 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HTR1EP28566 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HTR1EP28566 AL354989.2-201ENST00000435838 1540 ntBASIC13.61□□□□□ -0.23
HTR1EP28566 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms