Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATF3P18847 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ATF3P18847 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATF3P18847 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
ATF3P18847 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC18.98■□□□□ 0.63
ATF3P18847 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATF3P18847 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC18.98■□□□□ 0.63
ATF3P18847 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
ATF3P18847 AC010503.4-201ENST00000615487 688 ntBASIC18.98■□□□□ 0.63
ATF3P18847 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
ATF3P18847 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ATF3P18847 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC18.98■□□□□ 0.63
ATF3P18847 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC18.98■□□□□ 0.63
ATF3P18847 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATF3P18847 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC18.98■□□□□ 0.63
ATF3P18847 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATF3P18847 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATF3P18847 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATF3P18847 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATF3P18847 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATF3P18847 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.97■□□□□ 0.63
ATF3P18847 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
ATF3P18847 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
ATF3P18847 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATF3P18847 STK16-202ENST00000409260 1493 ntTSL 5 BASIC18.97■□□□□ 0.63
ATF3P18847 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ATF3P18847 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ATF3P18847 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATF3P18847 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATF3P18847 AC097474.1-201ENST00000506481 1371 ntBASIC18.97■□□□□ 0.63
ATF3P18847 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATF3P18847 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
ATF3P18847 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATF3P18847 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATF3P18847 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATF3P18847 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC18.97■□□□□ 0.63
ATF3P18847 MIR1226-201ENST00000408658 75 ntBASIC18.97■□□□□ 0.63
ATF3P18847 WDR54-202ENST00000409791 854 ntTSL 3 BASIC18.97■□□□□ 0.63
ATF3P18847 CA5BP1-205ENST00000435806 1064 ntBASIC18.97■□□□□ 0.63
ATF3P18847 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC18.97■□□□□ 0.63
ATF3P18847 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC18.97■□□□□ 0.63
ATF3P18847 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC18.97■□□□□ 0.63
ATF3P18847 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC18.97■□□□□ 0.63
ATF3P18847 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ATF3P18847 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC18.97■□□□□ 0.63
ATF3P18847 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC18.97■□□□□ 0.63
ATF3P18847 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC18.97■□□□□ 0.63
ATF3P18847 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC18.97■□□□□ 0.63
ATF3P18847 AL139424.3-202ENST00000641619 917 ntBASIC18.97■□□□□ 0.63
ATF3P18847 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
ATF3P18847 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
ATF3P18847 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC18.97■□□□□ 0.63
ATF3P18847 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATF3P18847 AC013268.4-201ENST00000637413 2228 ntBASIC18.97■□□□□ 0.63
ATF3P18847 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.97■□□□□ 0.63
ATF3P18847 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC18.97■□□□□ 0.63
ATF3P18847 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
ATF3P18847 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATF3P18847 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATF3P18847 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC18.97■□□□□ 0.63
ATF3P18847 HPD-204ENST00000543163 1709 ntTSL 5 BASIC18.97■□□□□ 0.63
ATF3P18847 AL031590.1-202ENST00000641466 1737 ntBASIC18.97■□□□□ 0.63
ATF3P18847 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATF3P18847 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATF3P18847 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATF3P18847 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATF3P18847 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATF3P18847 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATF3P18847 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATF3P18847 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC18.96■□□□□ 0.63
ATF3P18847 RN7SL832P-201ENST00000607781 1756 ntBASIC18.96■□□□□ 0.63
ATF3P18847 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
ATF3P18847 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATF3P18847 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATF3P18847 AL591499.1-201ENST00000307155 1153 ntBASIC18.96■□□□□ 0.63
ATF3P18847 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC18.96■□□□□ 0.63
ATF3P18847 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC18.96■□□□□ 0.63
ATF3P18847 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC18.96■□□□□ 0.63
ATF3P18847 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATF3P18847 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC18.96■□□□□ 0.63
ATF3P18847 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ATF3P18847 BOLA3P2-201ENST00000586496 323 ntBASIC18.96■□□□□ 0.63
ATF3P18847 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ATF3P18847 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC18.96■□□□□ 0.63
ATF3P18847 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
ATF3P18847 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC18.96■□□□□ 0.63
ATF3P18847 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATF3P18847 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATF3P18847 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.96■□□□□ 0.63
ATF3P18847 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATF3P18847 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATF3P18847 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATF3P18847 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATF3P18847 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATF3P18847 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC18.95■□□□□ 0.62
ATF3P18847 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ATF3P18847 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC18.95■□□□□ 0.62
ATF3P18847 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATF3P18847 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC18.95■□□□□ 0.62
ATF3P18847 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms