Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
HLA-DOBP13765 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
HLA-DOBP13765 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 AL590824.1-201ENST00000403828 1349 ntBASIC12.71□□□□□ -0.37
HLA-DOBP13765 SHMT1P1-201ENST00000419974 1312 ntBASIC12.71□□□□□ -0.37
HLA-DOBP13765 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 LINC01165-201ENST00000445190 1623 ntBASIC12.71□□□□□ -0.37
HLA-DOBP13765 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DOBP13765 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DOBP13765 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 AC125604.1-201ENST00000496255 707 ntBASIC12.71□□□□□ -0.37
HLA-DOBP13765 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.71□□□□□ -0.37
HLA-DOBP13765 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DOBP13765 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC12.71□□□□□ -0.37
HLA-DOBP13765 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.71□□□□□ -0.37
HLA-DOBP13765 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
HLA-DOBP13765 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DOBP13765 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DOBP13765 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
HLA-DOBP13765 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DOBP13765 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DOBP13765 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.71□□□□□ -0.38
HLA-DOBP13765 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DOBP13765 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.71□□□□□ -0.38
HLA-DOBP13765 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
HLA-DOBP13765 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DOBP13765 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DOBP13765 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DOBP13765 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DOBP13765 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.71□□□□□ -0.38
HLA-DOBP13765 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.38
HLA-DOBP13765 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
HLA-DOBP13765 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DOBP13765 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.7□□□□□ -0.38
HLA-DOBP13765 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DOBP13765 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DOBP13765 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DOBP13765 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DOBP13765 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DOBP13765 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DOBP13765 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
HLA-DOBP13765 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DOBP13765 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DOBP13765 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DOBP13765 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DOBP13765 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DOBP13765 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
HLA-DOBP13765 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DOBP13765 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DOBP13765 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.7□□□□□ -0.38
HLA-DOBP13765 AC006033.1-201ENST00000440505 426 ntBASIC12.7□□□□□ -0.38
HLA-DOBP13765 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DOBP13765 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DOBP13765 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.7□□□□□ -0.38
HLA-DOBP13765 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
HLA-DOBP13765 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.7□□□□□ -0.38
HLA-DOBP13765 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.7□□□□□ -0.38
HLA-DOBP13765 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
HLA-DOBP13765 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DOBP13765 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DOBP13765 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.7□□□□□ -0.38
HLA-DOBP13765 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DOBP13765 KRT8P21-201ENST00000430398 1491 ntBASIC12.7□□□□□ -0.38
HLA-DOBP13765 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
HLA-DOBP13765 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.7□□□□□ -0.38
HLA-DOBP13765 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DOBP13765 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DOBP13765 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DOBP13765 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DOBP13765 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DOBP13765 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
HLA-DOBP13765 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.7□□□□□ -0.38
HLA-DOBP13765 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DOBP13765 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
HLA-DOBP13765 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DOBP13765 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DOBP13765 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
HLA-DOBP13765 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DOBP13765 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DOBP13765 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-DOBP13765 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms