Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
DEFA4P12838 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
DEFA4P12838 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC11.61□□□□□ -0.55
DEFA4P12838 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC11.61□□□□□ -0.55
DEFA4P12838 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC11.61□□□□□ -0.55
DEFA4P12838 AC112492.5-201ENST00000421897 457 ntBASIC11.61□□□□□ -0.55
DEFA4P12838 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC11.61□□□□□ -0.55
DEFA4P12838 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.61□□□□□ -0.55
DEFA4P12838 AL590640.2-201ENST00000457038 527 ntBASIC11.61□□□□□ -0.55
DEFA4P12838 AC007551.1-201ENST00000457394 519 ntBASIC11.61□□□□□ -0.55
DEFA4P12838 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC11.61□□□□□ -0.55
DEFA4P12838 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC11.61□□□□□ -0.55
DEFA4P12838 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC11.61□□□□□ -0.55
DEFA4P12838 AL596325.1-201ENST00000563991 1082 ntBASIC11.61□□□□□ -0.55
DEFA4P12838 AC132938.2-201ENST00000579188 680 ntBASIC11.61□□□□□ -0.55
DEFA4P12838 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC11.61□□□□□ -0.55
DEFA4P12838 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC11.61□□□□□ -0.55
DEFA4P12838 AC008735.3-201ENST00000596646 500 ntBASIC11.61□□□□□ -0.55
DEFA4P12838 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC11.61□□□□□ -0.55
DEFA4P12838 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC11.61□□□□□ -0.55
DEFA4P12838 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC11.61□□□□□ -0.55
DEFA4P12838 AC002472.3-201ENST00000640124 621 ntBASIC11.61□□□□□ -0.55
DEFA4P12838 AL591163.1-201ENST00000641757 987 ntBASIC11.61□□□□□ -0.55
DEFA4P12838 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC11.61□□□□□ -0.55
DEFA4P12838 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC11.61□□□□□ -0.55
DEFA4P12838 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC11.61□□□□□ -0.55
DEFA4P12838 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.61□□□□□ -0.55
DEFA4P12838 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC11.61□□□□□ -0.55
DEFA4P12838 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC11.61□□□□□ -0.55
DEFA4P12838 AGAP12P-201ENST00000585227 2359 ntBASIC11.61□□□□□ -0.55
DEFA4P12838 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
DEFA4P12838 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC11.61□□□□□ -0.55
DEFA4P12838 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
DEFA4P12838 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
DEFA4P12838 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
DEFA4P12838 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
DEFA4P12838 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
DEFA4P12838 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
DEFA4P12838 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC11.6□□□□□ -0.55
DEFA4P12838 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
DEFA4P12838 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
DEFA4P12838 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
DEFA4P12838 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
DEFA4P12838 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC11.6□□□□□ -0.55
DEFA4P12838 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
DEFA4P12838 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC11.6□□□□□ -0.55
DEFA4P12838 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.6□□□□□ -0.55
DEFA4P12838 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
DEFA4P12838 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC11.6□□□□□ -0.55
DEFA4P12838 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC11.6□□□□□ -0.55
DEFA4P12838 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
DEFA4P12838 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
DEFA4P12838 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
DEFA4P12838 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC11.6□□□□□ -0.55
DEFA4P12838 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
DEFA4P12838 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
DEFA4P12838 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
DEFA4P12838 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC11.6□□□□□ -0.55
DEFA4P12838 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
DEFA4P12838 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
DEFA4P12838 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
DEFA4P12838 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
DEFA4P12838 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
DEFA4P12838 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC11.6□□□□□ -0.55
DEFA4P12838 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
DEFA4P12838 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
DEFA4P12838 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
DEFA4P12838 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
DEFA4P12838 RN7SKP175-201ENST00000408472 289 ntBASIC11.6□□□□□ -0.55
DEFA4P12838 CD8B2-202ENST00000417670 633 ntBASIC11.6□□□□□ -0.55
DEFA4P12838 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC11.6□□□□□ -0.55
DEFA4P12838 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC11.6□□□□□ -0.55
DEFA4P12838 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
DEFA4P12838 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC11.6□□□□□ -0.55
DEFA4P12838 FAM197Y7-201ENST00000432892 766 ntBASIC11.6□□□□□ -0.55
DEFA4P12838 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC11.6□□□□□ -0.55
DEFA4P12838 AL035414.1-201ENST00000451327 857 ntBASIC11.6□□□□□ -0.55
DEFA4P12838 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
DEFA4P12838 LHX6-205ENST00000464484 666 ntTSL 2 BASIC11.6□□□□□ -0.55
DEFA4P12838 FTH1P14-201ENST00000482930 551 ntBASIC11.6□□□□□ -0.55
DEFA4P12838 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
DEFA4P12838 COX5BP1-201ENST00000507622 393 ntBASIC11.6□□□□□ -0.55
DEFA4P12838 ALG3P1-201ENST00000508806 1114 ntBASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms