Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 RP2-201ENST00000218340 3803 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 WDR37-201ENST00000263150 4462 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 ANXA11-202ENST00000372231 6720 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 AL031714.1-201ENST00000567829 2926 ntTSL 5 BASIC11.28□□□□□ -0.6
APOC3P02656 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC11.28□□□□□ -0.6
APOC3P02656 ZNF23-201ENST00000357254 3186 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
APOC3P02656 PRPH2-201ENST00000230381 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
APOC3P02656 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.28□□□□□ -0.6
APOC3P02656 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 CHCHD2P8-201ENST00000429873 447 ntBASIC11.28□□□□□ -0.6
APOC3P02656 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC11.28□□□□□ -0.6
APOC3P02656 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC11.28□□□□□ -0.6
APOC3P02656 CXCL1P1-201ENST00000502804 216 ntBASIC11.28□□□□□ -0.6
APOC3P02656 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC11.28□□□□□ -0.6
APOC3P02656 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC11.28□□□□□ -0.6
APOC3P02656 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC11.28□□□□□ -0.6
APOC3P02656 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
APOC3P02656 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.28□□□□□ -0.6
APOC3P02656 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC11.28□□□□□ -0.6
APOC3P02656 RARRES2P6-201ENST00000567333 442 ntBASIC11.28□□□□□ -0.6
APOC3P02656 CD7-202ENST00000578509 925 ntTSL 3 BASIC11.28□□□□□ -0.6
APOC3P02656 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC11.28□□□□□ -0.6
APOC3P02656 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
APOC3P02656 AC006557.2-201ENST00000592985 1240 ntBASIC11.28□□□□□ -0.6
APOC3P02656 PDE4C-206ENST00000594465 2988 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC11.28□□□□□ -0.6
APOC3P02656 AC083849.1-201ENST00000615227 514 ntBASIC11.28□□□□□ -0.6
APOC3P02656 PIP5K1A-203ENST00000368890 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 EPB41L4A-201ENST00000261486 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 ZNF300-203ENST00000418587 3226 ntTSL 2 BASIC11.28□□□□□ -0.6
APOC3P02656 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC11.28□□□□□ -0.6
APOC3P02656 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
APOC3P02656 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 ADCK1-202ENST00000341211 1972 ntTSL 2 BASIC11.28□□□□□ -0.6
APOC3P02656 RHBDD1-201ENST00000341329 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC11.28□□□□□ -0.6
APOC3P02656 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 YWHAB-202ENST00000372839 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 CDC25B-201ENST00000245960 3597 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
APOC3P02656 TYRO3-202ENST00000559066 3876 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
APOC3P02656 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
APOC3P02656 SCNN1A-203ENST00000360168 3481 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC3P02656 IGHMBP2-201ENST00000255078 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
APOC3P02656 PCDHGA7-202ENST00000617050 3262 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
APOC3P02656 EPHB4-202ENST00000360620 3789 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
APOC3P02656 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
APOC3P02656 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
APOC3P02656 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
APOC3P02656 ETV5-201ENST00000306376 4111 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
APOC3P02656 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
APOC3P02656 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
APOC3P02656 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC11.27□□□□□ -0.61
APOC3P02656 TIAM2-201ENST00000275246 2491 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
APOC3P02656 SIN3A-208ENST00000567289 4078 ntTSL 2 BASIC11.27□□□□□ -0.61
APOC3P02656 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOC3P02656 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC11.27□□□□□ -0.61
APOC3P02656 MRPL20P1-201ENST00000400819 433 ntBASIC11.27□□□□□ -0.61
APOC3P02656 IGHV3-47-201ENST00000425060 335 ntBASIC11.27□□□□□ -0.61
APOC3P02656 TARDBPP1-201ENST00000442013 1203 ntBASIC11.27□□□□□ -0.61
APOC3P02656 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC11.27□□□□□ -0.61
APOC3P02656 AC004066.1-201ENST00000502488 802 ntBASIC11.27□□□□□ -0.61
APOC3P02656 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC11.27□□□□□ -0.61
APOC3P02656 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.27□□□□□ -0.61
APOC3P02656 KRT18P6-201ENST00000555540 1265 ntBASIC11.27□□□□□ -0.61
APOC3P02656 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.27□□□□□ -0.61
APOC3P02656 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC11.27□□□□□ -0.61
APOC3P02656 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
APOC3P02656 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
APOC3P02656 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
APOC3P02656 NKG7-205ENST00000600427 520 ntTSL 3 BASIC11.27□□□□□ -0.61
APOC3P02656 AC008667.4-201ENST00000607370 168 ntBASIC11.27□□□□□ -0.61
APOC3P02656 SNX21-213ENST00000614929 587 ntTSL 5 BASIC11.27□□□□□ -0.61
APOC3P02656 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.27□□□□□ -0.61
APOC3P02656 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC11.27□□□□□ -0.61
APOC3P02656 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
APOC3P02656 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC11.27□□□□□ -0.61
APOC3P02656 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC11.27□□□□□ -0.61
APOC3P02656 PPP1R26P5-201ENST00000416640 3664 ntBASIC11.27□□□□□ -0.61
APOC3P02656 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC11.27□□□□□ -0.61
APOC3P02656 RABL2B-201ENST00000354869 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOC3P02656 NMT2-202ENST00000378165 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOC3P02656 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOC3P02656 TSNAXIP1-201ENST00000388833 2429 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms