Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC1P02654 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC1P02654 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.64□□□□□ -0.39
APOC1P02654 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC1P02654 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
APOC1P02654 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
APOC1P02654 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
APOC1P02654 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
APOC1P02654 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 AL805961.2-201ENST00000642139 4817 ntBASIC12.63□□□□□ -0.39
APOC1P02654 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.63□□□□□ -0.39
APOC1P02654 AL022313.4-201ENST00000562756 2046 ntBASIC12.63□□□□□ -0.39
APOC1P02654 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.63□□□□□ -0.39
APOC1P02654 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.63□□□□□ -0.39
APOC1P02654 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.63□□□□□ -0.39
APOC1P02654 AC234783.1-201ENST00000441761 496 ntBASIC12.63□□□□□ -0.39
APOC1P02654 AC012441.2-201ENST00000444843 739 ntBASIC12.63□□□□□ -0.39
APOC1P02654 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.63□□□□□ -0.39
APOC1P02654 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.63□□□□□ -0.39
APOC1P02654 KLF2P4-201ENST00000451959 1225 ntBASIC12.63□□□□□ -0.39
APOC1P02654 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.63□□□□□ -0.39
APOC1P02654 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.63□□□□□ -0.39
APOC1P02654 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
APOC1P02654 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.63□□□□□ -0.39
APOC1P02654 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.63□□□□□ -0.39
APOC1P02654 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.63□□□□□ -0.39
APOC1P02654 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.63□□□□□ -0.39
APOC1P02654 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.63□□□□□ -0.39
APOC1P02654 MIR6720-201ENST00000611664 98 ntBASIC12.63□□□□□ -0.39
APOC1P02654 AC008687.7-202ENST00000637404 953 ntBASIC12.63□□□□□ -0.39
APOC1P02654 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.63□□□□□ -0.39
APOC1P02654 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.63□□□□□ -0.39
APOC1P02654 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
APOC1P02654 AR-208ENST00000612452 10676 ntTSL 5 BASIC12.63□□□□□ -0.39
APOC1P02654 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.63□□□□□ -0.39
APOC1P02654 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
APOC1P02654 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.63□□□□□ -0.39
APOC1P02654 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
APOC1P02654 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.63□□□□□ -0.39
APOC1P02654 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC1P02654 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC1P02654 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC1P02654 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 AC134407.3-201ENST00000624035 2139 ntBASIC12.62□□□□□ -0.39
APOC1P02654 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
APOC1P02654 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC1P02654 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.62□□□□□ -0.39
APOC1P02654 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC1P02654 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
APOC1P02654 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
APOC1P02654 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms