Protein–RNA interactions for Protein: P01911

HLA-DRB1, HLA class II histocompatibility antigen, DRB1-15 beta chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1P01911 AC009779.1-201ENST00000551138 283 ntBASIC11.45□□□□□ -0.58
HLA-DRB1P01911 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 MIR6869-201ENST00000619434 62 ntBASIC11.45□□□□□ -0.58
HLA-DRB1P01911 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB1P01911 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 AC007274.1-201ENST00000439805 662 ntBASIC11.44□□□□□ -0.58
HLA-DRB1P01911 AC104073.2-201ENST00000453737 312 ntBASIC11.44□□□□□ -0.58
HLA-DRB1P01911 OARD1-204ENST00000464633 717 ntTSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 OARD1-212ENST00000482515 832 ntTSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 AC044849.1-201ENST00000519737 1188 ntBASIC11.44□□□□□ -0.58
HLA-DRB1P01911 AP001258.2-201ENST00000529891 490 ntBASIC11.44□□□□□ -0.58
HLA-DRB1P01911 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 AC243960.2-201ENST00000600996 747 ntBASIC11.44□□□□□ -0.58
HLA-DRB1P01911 AC138649.2-201ENST00000615886 705 ntBASIC11.44□□□□□ -0.58
HLA-DRB1P01911 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 DDX5-235ENST00000630471 473 ntTSL 4 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 Z82170.1-201ENST00000625081 3192 ntBASIC11.44□□□□□ -0.58
HLA-DRB1P01911 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB1P01911 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC11.43□□□□□ -0.58
HLA-DRB1P01911 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB1P01911 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
HLA-DRB1P01911 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB1P01911 AL022313.4-201ENST00000562756 2046 ntBASIC11.43□□□□□ -0.58
HLA-DRB1P01911 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms