Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 AP000244.1-201ENST00000424582 201 ntBASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 AL451000.1-201ENST00000451300 1186 ntBASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 KRT18P15-201ENST00000458108 1291 ntBASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 COQ10BP2-201ENST00000513804 724 ntBASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 SRP14-204ENST00000558720 780 ntTSL 2 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 HMGA1P1-201ENST00000415560 1062 ntBASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 CASP3-205ENST00000517513 964 ntTSL 5 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 AC232323.1-201ENST00000540724 2099 ntBASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC187A0A096LP49 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms