Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC099063.4-201ENST00000641099 1602 ntBASIC15.8■□□□□ 0.12
COL20A1Q9P218 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
COL20A1Q9P218 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL20A1Q9P218 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL20A1Q9P218 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
COL20A1Q9P218 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL20A1Q9P218 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL20A1Q9P218 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC15.8■□□□□ 0.12
COL20A1Q9P218 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC15.8■□□□□ 0.12
COL20A1Q9P218 AQP7P5-201ENST00000428759 1049 ntBASIC15.8■□□□□ 0.12
COL20A1Q9P218 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC15.8■□□□□ 0.12
COL20A1Q9P218 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC15.8■□□□□ 0.12
COL20A1Q9P218 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.8■□□□□ 0.12
COL20A1Q9P218 AQP7P4-201ENST00000447083 1042 ntBASIC15.8■□□□□ 0.12
COL20A1Q9P218 AQP7P2-201ENST00000453967 1041 ntBASIC15.8■□□□□ 0.12
COL20A1Q9P218 AQP7P3-201ENST00000624547 1041 ntBASIC15.8■□□□□ 0.12
COL20A1Q9P218 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL20A1Q9P218 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL20A1Q9P218 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL20A1Q9P218 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL20A1Q9P218 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL20A1Q9P218 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL20A1Q9P218 AL365181.3-201ENST00000605886 3222 ntBASIC15.8■□□□□ 0.12
COL20A1Q9P218 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
COL20A1Q9P218 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL20A1Q9P218 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC15.8■□□□□ 0.12
COL20A1Q9P218 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL20A1Q9P218 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC15.8■□□□□ 0.12
COL20A1Q9P218 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC15.79■□□□□ 0.12
COL20A1Q9P218 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL20A1Q9P218 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL20A1Q9P218 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL20A1Q9P218 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
COL20A1Q9P218 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
COL20A1Q9P218 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
COL20A1Q9P218 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COL20A1Q9P218 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL20A1Q9P218 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
COL20A1Q9P218 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL20A1Q9P218 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL20A1Q9P218 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL20A1Q9P218 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC15.79■□□□□ 0.12
COL20A1Q9P218 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
COL20A1Q9P218 TREHP1-201ENST00000531328 465 ntBASIC15.79■□□□□ 0.12
COL20A1Q9P218 FOXN3-AS2-201ENST00000554071 1262 ntBASIC15.79■□□□□ 0.12
COL20A1Q9P218 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC15.79■□□□□ 0.12
COL20A1Q9P218 MIR4472-1-201ENST00000584349 80 ntBASIC15.79■□□□□ 0.12
COL20A1Q9P218 AC010976.2-201ENST00000609697 852 ntBASIC15.79■□□□□ 0.12
COL20A1Q9P218 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC15.79■□□□□ 0.12
COL20A1Q9P218 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
COL20A1Q9P218 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.79■□□□□ 0.12
COL20A1Q9P218 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.79■□□□□ 0.12
COL20A1Q9P218 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
COL20A1Q9P218 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
COL20A1Q9P218 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL20A1Q9P218 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COL20A1Q9P218 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL20A1Q9P218 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC15.79■□□□□ 0.12
COL20A1Q9P218 AC073869.1-201ENST00000415574 2762 ntBASIC15.79■□□□□ 0.12
COL20A1Q9P218 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL20A1Q9P218 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC15.79■□□□□ 0.12
COL20A1Q9P218 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL20A1Q9P218 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
COL20A1Q9P218 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
COL20A1Q9P218 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL20A1Q9P218 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL20A1Q9P218 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL20A1Q9P218 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
COL20A1Q9P218 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL20A1Q9P218 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL20A1Q9P218 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL20A1Q9P218 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL20A1Q9P218 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL20A1Q9P218 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL20A1Q9P218 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
COL20A1Q9P218 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.78■□□□□ 0.12
COL20A1Q9P218 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.78■□□□□ 0.12
COL20A1Q9P218 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC15.78■□□□□ 0.12
COL20A1Q9P218 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL20A1Q9P218 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL20A1Q9P218 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
COL20A1Q9P218 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL20A1Q9P218 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL20A1Q9P218 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.78■□□□□ 0.12
COL20A1Q9P218 LINP1-201ENST00000417112 917 ntTSL 2 BASIC15.78■□□□□ 0.12
COL20A1Q9P218 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC15.78■□□□□ 0.12
COL20A1Q9P218 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC15.78■□□□□ 0.12
COL20A1Q9P218 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC15.78■□□□□ 0.12
COL20A1Q9P218 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC15.78■□□□□ 0.12
COL20A1Q9P218 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC15.78■□□□□ 0.12
COL20A1Q9P218 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.78■□□□□ 0.12
COL20A1Q9P218 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL20A1Q9P218 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL20A1Q9P218 C2orf69P1-201ENST00000563532 1093 ntBASIC15.78■□□□□ 0.12
COL20A1Q9P218 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL20A1Q9P218 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL20A1Q9P218 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC15.78■□□□□ 0.12
COL20A1Q9P218 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL20A1Q9P218 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL20A1Q9P218 AC002472.4-201ENST00000641915 272 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms