Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AL451050.2-201ENST00000606967 682 ntBASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 AL118558.3-201ENST00000607414 1079 ntBASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 AC138649.2-201ENST00000615886 705 ntBASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 MARK2P16-201ENST00000605714 1723 ntBASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 AC108024.1-201ENST00000626286 1721 ntBASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 AL591122.2-201ENST00000624125 1853 ntBASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 AC004554.1-201ENST00000422830 1468 ntBASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.8□□□□□ -0.2
PDLIM5Q96HC4 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 AL355102.3-201ENST00000554299 1678 ntBASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 CR383656.2-201ENST00000548656 2254 ntBASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 AC016700.1-201ENST00000429424 312 ntBASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 AC091804.1-201ENST00000486888 567 ntBASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 AC108725.1-201ENST00000495472 409 ntBASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 NDUFB10P1-201ENST00000567319 521 ntBASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 MIR6752-201ENST00000618442 71 ntBASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 TUBBP5-203ENST00000508529 1334 ntBASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.79□□□□□ -0.2
PDLIM5Q96HC4 MSNP1-201ENST00000511640 1732 ntBASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 Z98885.3-201ENST00000624882 1757 ntBASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 AC006033.1-201ENST00000440505 426 ntBASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms