Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNED1Q8TER0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNED1Q8TER0 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNED1Q8TER0 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SNED1Q8TER0 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SNED1Q8TER0 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNED1Q8TER0 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNED1Q8TER0 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNED1Q8TER0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNED1Q8TER0 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNED1Q8TER0 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNED1Q8TER0 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNED1Q8TER0 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.79■□□□□ 0.28
SNED1Q8TER0 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNED1Q8TER0 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNED1Q8TER0 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNED1Q8TER0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.79■□□□□ 0.28
SNED1Q8TER0 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC16.79■□□□□ 0.28
SNED1Q8TER0 AC000077.1-201ENST00000420012 953 ntBASIC16.79■□□□□ 0.28
SNED1Q8TER0 FAM197Y6-201ENST00000420524 766 ntBASIC16.79■□□□□ 0.28
SNED1Q8TER0 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC16.79■□□□□ 0.28
SNED1Q8TER0 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC16.79■□□□□ 0.28
SNED1Q8TER0 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC16.79■□□□□ 0.28
SNED1Q8TER0 SNRPD2P2-201ENST00000473818 333 ntBASIC16.79■□□□□ 0.28
SNED1Q8TER0 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC16.79■□□□□ 0.28
SNED1Q8TER0 AC010202.1-201ENST00000551181 405 ntBASIC16.79■□□□□ 0.28
SNED1Q8TER0 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SNED1Q8TER0 RN7SL134P-201ENST00000579756 303 ntBASIC16.79■□□□□ 0.28
SNED1Q8TER0 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNED1Q8TER0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 HLF-202ENST00000430986 1385 ntTSL 2 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNED1Q8TER0 RCC2P1-201ENST00000452257 1476 ntBASIC16.78■□□□□ 0.28
SNED1Q8TER0 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNED1Q8TER0 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNED1Q8TER0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNED1Q8TER0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNED1Q8TER0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNED1Q8TER0 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNED1Q8TER0 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 AL513477.1-201ENST00000602865 2407 ntBASIC16.78■□□□□ 0.28
SNED1Q8TER0 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 AC011477.7-201ENST00000617163 1440 ntBASIC16.78■□□□□ 0.28
SNED1Q8TER0 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNED1Q8TER0 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNED1Q8TER0 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNED1Q8TER0 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNED1Q8TER0 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNED1Q8TER0 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNED1Q8TER0 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNED1Q8TER0 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNED1Q8TER0 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 AC007279.1-201ENST00000448547 837 ntBASIC16.78■□□□□ 0.28
SNED1Q8TER0 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 AC008494.1-201ENST00000497612 796 ntBASIC16.78■□□□□ 0.28
SNED1Q8TER0 AC093700.1-201ENST00000503348 717 ntBASIC16.78■□□□□ 0.28
SNED1Q8TER0 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 AP000920.1-201ENST00000531824 344 ntBASIC16.78■□□□□ 0.28
SNED1Q8TER0 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 AC142086.5-202ENST00000562500 217 ntBASIC16.78■□□□□ 0.28
SNED1Q8TER0 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC16.78■□□□□ 0.28
SNED1Q8TER0 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNED1Q8TER0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNED1Q8TER0 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNED1Q8TER0 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNED1Q8TER0 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNED1Q8TER0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SNED1Q8TER0 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNED1Q8TER0 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SNED1Q8TER0 AL596257.1-201ENST00000641463 2694 ntBASIC16.77■□□□□ 0.28
SNED1Q8TER0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNED1Q8TER0 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.77■□□□□ 0.28
SNED1Q8TER0 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNED1Q8TER0 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC16.77■□□□□ 0.28
SNED1Q8TER0 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC16.77■□□□□ 0.28
SNED1Q8TER0 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SNED1Q8TER0 GUCY2EP-203ENST00000531117 1918 ntBASIC16.77■□□□□ 0.28
SNED1Q8TER0 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SNED1Q8TER0 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
SNED1Q8TER0 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNED1Q8TER0 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNED1Q8TER0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SNED1Q8TER0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNED1Q8TER0 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms