Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 CR392039.2-201ENST00000623182 509 ntBASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 AC117489.1-201ENST00000625169 3217 ntBASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ARHGEF39Q8N4T4 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ARHGEF39Q8N4T4 GOLGA8UP-201ENST00000527159 1755 ntBASIC13.27□□□□□ -0.28
ARHGEF39Q8N4T4 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ARHGEF39Q8N4T4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ARHGEF39Q8N4T4 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
ARHGEF39Q8N4T4 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ARHGEF39Q8N4T4 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
ARHGEF39Q8N4T4 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC13.27□□□□□ -0.28
ARHGEF39Q8N4T4 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ARHGEF39Q8N4T4 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ARHGEF39Q8N4T4 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.27□□□□□ -0.28
ARHGEF39Q8N4T4 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.27□□□□□ -0.28
ARHGEF39Q8N4T4 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
ARHGEF39Q8N4T4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 CELP-201ENST00000411440 1249 ntTSL 5 BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 RPL3P2-204ENST00000413027 1203 ntBASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 AC092573.1-201ENST00000433054 884 ntBASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 EEF1DP2-201ENST00000433698 843 ntBASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 RN7SL181P-201ENST00000462921 277 ntBASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 RN7SL564P-201ENST00000496309 250 ntBASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 AL031713.1-201ENST00000564813 661 ntBASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 MIR4706-201ENST00000582134 82 ntBASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 AC087045.2-201ENST00000606279 1003 ntBASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 AC007250.1-201ENST00000608934 338 ntBASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 ODCP-201ENST00000459650 1639 ntBASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ARHGEF39Q8N4T4 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ARHGEF39Q8N4T4 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
ARHGEF39Q8N4T4 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ARHGEF39Q8N4T4 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ARHGEF39Q8N4T4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ARHGEF39Q8N4T4 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
ARHGEF39Q8N4T4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ARHGEF39Q8N4T4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
ARHGEF39Q8N4T4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ARHGEF39Q8N4T4 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
ARHGEF39Q8N4T4 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ARHGEF39Q8N4T4 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ARHGEF39Q8N4T4 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ARHGEF39Q8N4T4 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ARHGEF39Q8N4T4 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ARHGEF39Q8N4T4 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC13.26□□□□□ -0.29
ARHGEF39Q8N4T4 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
ARHGEF39Q8N4T4 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ARHGEF39Q8N4T4 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ARHGEF39Q8N4T4 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms