Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 MIR3619-201ENST00000579667 83 ntBASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 AP001505.2-201ENST00000616815 443 ntBASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
LYSMD3Q7Z3D4 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 AC103592.1-201ENST00000394513 664 ntBASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 HMGA1P1-201ENST00000415560 1062 ntBASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 OR8T1P-201ENST00000421347 918 ntBASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 AC012618.1-201ENST00000461223 412 ntBASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 AC138627.1-207ENST00000641560 1006 ntBASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 NUTM2HP-201ENST00000442076 2498 ntBASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD3Q7Z3D4 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD3Q7Z3D4 AC092506.1-202ENST00000401022 528 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms