Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 AC092139.4-201ENST00000624318 2794 ntBASIC13.37□□□□□ -0.27
LPCAT4Q643R3 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 MIR574-201ENST00000385209 96 ntBASIC13.37□□□□□ -0.27
LPCAT4Q643R3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 AC114812.1-204ENST00000449669 728 ntBASIC13.37□□□□□ -0.27
LPCAT4Q643R3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 AC005829.1-201ENST00000570002 483 ntBASIC13.37□□□□□ -0.27
LPCAT4Q643R3 MIR4469-201ENST00000583919 79 ntBASIC13.37□□□□□ -0.27
LPCAT4Q643R3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 AC020917.4-201ENST00000623994 1999 ntBASIC13.37□□□□□ -0.27
LPCAT4Q643R3 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 LRRC59-203ENST00000576448 1531 ntBASIC13.37□□□□□ -0.27
LPCAT4Q643R3 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LPCAT4Q643R3 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 AL583810.2-201ENST00000556430 3254 ntBASIC13.36□□□□□ -0.27
LPCAT4Q643R3 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LPCAT4Q643R3 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms